| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2322 |
|---|
| Symbol | |
|---|
| ID | 3845569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2846158 |
|---|
| End bp | 2847090 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637839622 |
|---|
| Product | polysaccharide deacetylase family protein |
|---|
| Protein accession | YP_440509 |
|---|
| Protein GI | 83716498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGATTCT CAGGCTCCTG GCTCATCCGA TTCCGGCTTG CGGCGGCGGC CTGGTGGCTC
GCATGGGCGA GCGTCGCGCC GCCCGCACTC GCCGACGCAA ACGCCGCCGC CGACGCGTCG
GGCCCCGCGA TCCTCGTCTA TCACCGCTTC TCGACATCCG CGCCGCCCGA TTCGATGACC
GTGCGCGTCA GCACGTTCGA CGCGCAGCTC GCGTTCCTGC GCGCGCATGG CTACACGATC
GTGCCGCTGC GCGACGTCGT CGCGTGGGTG GCGTCGCCGT CCGCGCCGCT GCCGGAAAAG
GCGGTCGCGA TCACCGTCGA CGACGGCCAC CGCTCGGTGT ACGAACTGCT GCGCCCGCTC
GTGCTGCGCG AGCGATTGCC CGTCACGCTG TTCATCTATC CGTCCGCGAT CTCGAACGCG
CCGTATGCGA TGACGTGGGA CGAACTGCGA GCGTTGCGCG ATACCGGCCG CTTCGACATC
GAATCGCACA CGTGGTGGCA TCCGAACTTC CGCACGGAGC GGCGACGCCT CGCGCCCGAC
GCGTTCCGCC GCTTCGCCGC AACCCAGTTC GCGCACGCGC GCGCGCTGCT CGAACGTGAA
GTCGGCGGCC CGGTCGATCT GCTCGCGTGG CCGTTCGGCA TCTATGACGA CGAGCTGACG
TCGCTCGCCG TGCAGGCCGG CTATGTCGCG GGCTTCACGC TCGACGCGCG CAAGGTCCGC
CGCGGCGACG CGCCGCTCGC GCTGCCGCGC TTTCTGATCG TCGACGGCTG CACGCCGGCC
GTGCTCGCGC GAATGCTCGA CGAGCGCGGC GATTCGCGTT CCGATGCGCG TGCCGATCCG
CGTGCCGATT CGAGTGCCGA TCCGCGCGCC GATTCGAGTG CCGATCCGCG CGCCGATTCG
AGTGCCGATC CGCGCGCGGG GGAATCACGA TGA
|
|---|
| Protein sequence | MRFSGSWLIR FRLAAAAWWL AWASVAPPAL ADANAAADAS GPAILVYHRF STSAPPDSMT
VRVSTFDAQL AFLRAHGYTI VPLRDVVAWV ASPSAPLPEK AVAITVDDGH RSVYELLRPL
VLRERLPVTL FIYPSAISNA PYAMTWDELR ALRDTGRFDI ESHTWWHPNF RTERRRLAPD
AFRRFAATQF AHARALLERE VGGPVDLLAW PFGIYDDELT SLAVQAGYVA GFTLDARKVR
RGDAPLALPR FLIVDGCTPA VLARMLDERG DSRSDARADP RADSSADPRA DSSADPRADS
SADPRAGESR
|
|---|
| |