| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2180 |
|---|
| Symbol | |
|---|
| ID | 3844836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2677841 |
|---|
| End bp | 2679454 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637839481 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_440368 |
|---|
| Protein GI | 83717947 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0470297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCA AAATCAAGCT CGCATCCGGC CTGCTCGGCG TGCTCGTCGT GTTCTGCCTG
TTTCTGATCG CGGTCGAGGG GCTCGGCTTC TGGTCGCTGT CCGCGTCGCG CAGCAACGTC
GACGATCTGT CCAACGTCGC GATCAAGCAG GCCGACGCGG CGACCGTCGC GACCCAGCAC
ATGCTCGACG CCCGCACCAA TCTGTCCCGC GCCAGCACGC GGATGGTGAA GGGCGATCCG
ATGCCCGCCG AGACGCTCCA GCACGTGCGC GACCAGCTCG CGCTCGCCGA CCGCGCGTTC
GCCGCCTTCA CGGCCGCGCC GACGATCAGC GCCGAGAACA CCGAGCGCGC GGCGGCGCTC
ACCGACCGCT ACCGCAAGTA CCACGCCGCG CTCGTCGATC TCGTGCAGTT CCTCGAATCC
AACAACATGC AGGCGTTTCT CGATCAGCCG ACGCAGCAGA TCCAGGACGC GTATCTCGGC
GAACTGCGCA CGTTCTCCGA ATTCAGCAGC CGCACGAGCG AGCACGCGCT CGGCATGATC
GACACCGGGA TGCACTGGTT CGAGACGGTC GGCGCGGTGC TGCTCGCGCT GATGCTCGCG
TGCATCGCGG GGATCTACGC CGTCGCGCGG CGTGCGGTGG TCGCGCCGCT CGCGCAGGCG
GGCGTGCATT TCGACCGGAT CGCGCAAGGC CGCCTCGACG AGACGGTGGC GCCGCACGGC
GTGCATGAAA TCGAGCGGCT GCTGCGCGGG CTCGCCGACA TGCAGGCGAG CGTCGCGGGC
ACCGTGCGCG TCGTGCGCAA CGCGTCGAAC GCGATCCACC TGGGCGCGGC CGAGATCGCG
AGCGGCAACG CGGACCTGTC CGCGCGCACG TCGAGCCAGG CCGCATCGCT CGAGCAAACG
GCGGCGAGCA TGGAGGAGCT GACCGCGACC GTGCGGCAGA ACAGCGATAG CGCGCGCGCG
GCGAGCTCGC TTGCCGACGA CGCGCTGCGA ACGACGAAGA ACGGCGCAGC GATCGTCGAC
GACGTGGTCG ACAAGATGCA CGGCATCGCG CGCAGCTCGG GCCGCATCGC GGAGATCATC
GCGGTGATCG ACGGCATCGC GTTCCAGACC AACATCCTCG CGCTGAACGC GGCCGTCGAG
GCGGCGCGCG CGGGCGAGGA GGGGCGTGGC TTCGCGGTGG TCGCGGGCGA GGTGCGCGCG
CTCGCGCAGC GCAGCGCGCA GTCGGCCAAG GAGATCAAGC TGCTGATCGA GGAATCGGTC
GCGCAGATCG ACGGCGGCTC CGAGCTCGTC GAGCGCGCGG GCGAGGCGAT GCGCTCGGTG
TCCGCGTCGA TCGAGCGGGT CGCGCAGACG ATGACCGAGA TCACGGCCGC GTCGGTCGAG
CAGAGCGCGG GAATCGAGCA GGTCAACCAG GCGGTCACGC AGATGGAGCA GTTGACGCAG
CAGAACGCGG CGCTCGTCGA GGAAGTCGCG GCGGCGGCCG GTTCGCTCAA CGAGCAGACC
GAGCAGTTGC AGCAGTCGGT CTCGGTGTTC GAGCTCGGCG ATGCGCGCGA ACGCCGGCCC
GCCGCCGGCG CGGCGCGTGC CGGCGCGGCC GCGCCGCAAC GCGCGGGCGC GTAG
|
|---|
| Protein sequence | MFSKIKLASG LLGVLVVFCL FLIAVEGLGF WSLSASRSNV DDLSNVAIKQ ADAATVATQH
MLDARTNLSR ASTRMVKGDP MPAETLQHVR DQLALADRAF AAFTAAPTIS AENTERAAAL
TDRYRKYHAA LVDLVQFLES NNMQAFLDQP TQQIQDAYLG ELRTFSEFSS RTSEHALGMI
DTGMHWFETV GAVLLALMLA CIAGIYAVAR RAVVAPLAQA GVHFDRIAQG RLDETVAPHG
VHEIERLLRG LADMQASVAG TVRVVRNASN AIHLGAAEIA SGNADLSART SSQAASLEQT
AASMEELTAT VRQNSDSARA ASSLADDALR TTKNGAAIVD DVVDKMHGIA RSSGRIAEII
AVIDGIAFQT NILALNAAVE AARAGEEGRG FAVVAGEVRA LAQRSAQSAK EIKLLIEESV
AQIDGGSELV ERAGEAMRSV SASIERVAQT MTEITAASVE QSAGIEQVNQ AVTQMEQLTQ
QNAALVEEVA AAAGSLNEQT EQLQQSVSVF ELGDARERRP AAGAARAGAA APQRAGA
|
|---|
| |