| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2179 |
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| Symbol | |
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| ID | 3844902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 2676032 |
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| End bp | 2677795 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637839480 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_440367 |
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| Protein GI | 83717273 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00530113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCT GTAGCAATGA CACGCAACAG CCGCCCAGCC TAACATGCCG CTCTCCCGTT
CGCATCATGG TGTCCGGCAT GCACGACGCG CCTTCTCGAT CCGCTCCGAT GGAGCCCGTC
CTTCCTGCGT CGGGGCCGCC CGCCGCGTCC ACGTCCGTCC GCTCGCCCGT GCCGGCGCCC
CTTGCCGCGC CGTGCGCCGA CGCGCCGCCC GCGCACCGCA GCGCCGCGCG GCACGCGCTC
GCCACCGCGT CCGCGGTCTG CTCGCTGATC GTGCTCGACA CGAACGTCGT CGCGGTATCG
CTGCCGTCGA TCGCCCGCAC GTTTCATGCG AGCTTCGCGG ACATCGAATG GGTGGTGAGC
GCGTACATGA CCGCGTTCGC CGCTTGCCTG CTGCCGGCGG GCGGCCTCGC CGACCGCGCG
GGCCGCAAGC GCGTGCTGCT CGCCGGGCTC GCCGTGTTCT TCGTCGCGTC GCTCGGCTGC
GGGCTCGCGC CGTCGGCCGC ATCGCTCAAC GTCGCGCGCG CGGTCAAGGG CGTCGGCGCC
GCGATGCTGC TGACGTCGGC GCTCGCCGTG ATCGCGAACC GCTTCCCCGA CGGCCGAGAC
CGTGCGCGTG CGTGGGCGGT CTGGGGCATG TGCATGGGCA TCGCGACGAC GATCGCCCCG
CTCGCCGGCG GCGCGATCGC GCAATGGATC GGATGGCGCT GGATCTTCCT GCTGAACCTG
CCGGTGTGCA TCGCGCTCGC CGCGGCCGTC TGCGCGACGA TCGACGATTC GCGCGATCCG
CACGCAAAGC GCATCGACGC GCCGGGCAGC GTGCTGTTCG GCTCGGCGCT CGCGCTCGGC
ATCTGGGCGC TGATCGACGC GCCGCCGCAC GGCTGGGCGG CGCCCGGCAC GCTCGCGCGC
TTCGCGGCGA GCGCGGCGCT CTTCGTCGCG TTCGCGGCCG CCGAGCGCTG GCAGCGGCGT
CCAATGATCG ATCTCGCGCT GTTTCGAGAG CCACGCTTCG TCGGCGCGCT GCTCGCGATG
TTCGGCTACG CGGCGTGCGC GCAGGTGATG ATGACGTTCT TGCCGCTCTA CCTGCAGATC
GGCTTCGGGA TGTCGGCGAT CGCCGCGGGG CTCGGCATGC TGCCGTTCGC GCTCGCGATG
ATCGTCGGGC CCTCGCTCGG CGCGGCGCTG TCGGCGCGCG CGCCGGCCGC GACCGTGCTC
GGCTGCGGGC TCGCGCTGAT CGGCATCGGC GATTTCGTGA CCGCCGCGCT CGCGGGCGCG
TCGCATGACG GTCTCGTCGC GCTCGGGATG CTGGTCACCG GATGCGGCGC GGGCATCCTG
AACGGCGACA CGCAGAAGGC GATCATGGCG TGCGTGCCGC CGGAGCGGAC CGGAATGGCG
TCCGGGATCA GCACGACGAC GCGTTTTTCC GCAATCGTGA CCTCGGTCGG CGTGCTCGGC
GCGGTGCTCG CCGCGCGAAC CCACGCGGCG CTCGCCGAGC GCGTCGCGCA CGCGCCGGAG
CTGCTCGGCG CGCTCGATCC GCGCTTCATG TCGAGCCTGC TCGCGGGCGA TCTCGCGCAG
GCGATACGCG GCCTGCCGCC GCAAACGGGC GCGGCGCTCG CGCAAATCGC GCCCGCCGGC
TTCGCGAGCG GCTTCGCGCT CGCGCTGTGC GTGAGCGGCG CGTTCGCGCT CGCGGCGGCC
GTCGCGGTGC GGCTGCTCGT CGGCGCGAAG CCGGGGCGGG CCGCAGGAGC GCGCTCGATG
CGCGGCAAGC GGAGCGGCCG ATGA
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| Protein sequence | MNFCSNDTQQ PPSLTCRSPV RIMVSGMHDA PSRSAPMEPV LPASGPPAAS TSVRSPVPAP
LAAPCADAPP AHRSAARHAL ATASAVCSLI VLDTNVVAVS LPSIARTFHA SFADIEWVVS
AYMTAFAACL LPAGGLADRA GRKRVLLAGL AVFFVASLGC GLAPSAASLN VARAVKGVGA
AMLLTSALAV IANRFPDGRD RARAWAVWGM CMGIATTIAP LAGGAIAQWI GWRWIFLLNL
PVCIALAAAV CATIDDSRDP HAKRIDAPGS VLFGSALALG IWALIDAPPH GWAAPGTLAR
FAASAALFVA FAAAERWQRR PMIDLALFRE PRFVGALLAM FGYAACAQVM MTFLPLYLQI
GFGMSAIAAG LGMLPFALAM IVGPSLGAAL SARAPAATVL GCGLALIGIG DFVTAALAGA
SHDGLVALGM LVTGCGAGIL NGDTQKAIMA CVPPERTGMA SGISTTTRFS AIVTSVGVLG
AVLAARTHAA LAERVAHAPE LLGALDPRFM SSLLAGDLAQ AIRGLPPQTG AALAQIAPAG
FASGFALALC VSGAFALAAA VAVRLLVGAK PGRAAGARSM RGKRSGR
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