Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2135 |
Symbol | |
ID | 3844850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2622737 |
End bp | 2624005 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637839436 |
Product | porin |
Protein accession | YP_440323 |
Protein GI | 83717961 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.262884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAA TTGTCATATT CATTAAGCGC CCCGTCGATA CAGTGCGCTT CCGTTCCCCT TCCAAACGCC TTAAAGAGCG CCGCGGAACC GCAAACATTC TTACTGCTCG GAGATTTGTC TTGAACAAGA AACTGTTGAC CACCGCTATC CTCGCCGCAA CCGCAAGCGC GGCCCACGCA CAAAGCAGCG TGACGCTGTA CGGCCTCATC GACGCCGGCG TCAGCTACGT GAACCACAGC AAGAGCGCGA GCGGCAGCGA CAAGCTCTTC AAATACGACG ACGGCATCGC CCAGGGCAGC CGTTGGGGCC TGCGCGGCGC CGAAGACCTC GGCGGCGGCC TGAAGGCGAT CTTCGTGCTC GAAAACGGCT TCAACAGCGG CAACGGCACG ATCGGCCAGG GCGGCGCGAT CTTCGGCCGC CAGGCCTATG TCGGCCTGTC GCACAAGGAC GCCGGCACGC TGACGTTCGG CCGCCAGTAC TCGTTCTCGA CCGACATCCT CGGCTCGAAC TACTCGACGG GCGGCAACAC GGTCGCGGGC AACTACGCGT ACCACGTGAA CGACATCGAC CAATTGACGT CGAGCCGCAT CAACAACGCC GTGAAGTTCC AGAGCGCGAA CTACGCGGGC TTCACGTTCG GCGCGTTGTA CGGCTTCTCG AACTCGACGT CGTTCGCGGG CGCACCGGCG ACGACGAACG GCACGACGAC GACGCCCGGT TCGTCGCGCG CGTACAGCTT CGGCCTGAAC TACGCGAACG GCCCGATCGG CCTCGGCGCC GCGTACACCG ACATCCGCTA TCCGGGCCAG GCAGCGCCGG CGTTCACGAC CAACATCGCG AACCTGACGA TCAGCAACGT GCGCGACCTG CGCAGCTTCG GCGTCGGCGG CCGCTACATC TGGGGCCCGG CAACCCTCTG GGCGCTGTGG ACGAACACGC GCCTCGAGCC GATCACGGGC GGCAGCACGA CGTACAACGC GTACGAAGCG GGCGGCAAGT ACGCGTTCAC GCCGGCGTTG TCGGCAGGCG TCGGCTACAC GTACTCGCGC GTGTCGGGTG CGAACTCGGG CCACTGGAAC CAGGTCAACG GCGCGCTCGA CTACGCGCTC AGCAAGCGCA CCGACGTGTA CCTGCTCGCG ATCTACCAGG AAGCGTCGGG CAACAACCTG CAGGCGCAGA TCGGCTCGAG CACGAGCTAC TTCAACACGT CGGGCACGGG TTCGAAGAAC CAGTTCGCCG CGCGCGTCGG TATCCGCCAC AAGTTCTGA
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Protein sequence | MTAIVIFIKR PVDTVRFRSP SKRLKERRGT ANILTARRFV LNKKLLTTAI LAATASAAHA QSSVTLYGLI DAGVSYVNHS KSASGSDKLF KYDDGIAQGS RWGLRGAEDL GGGLKAIFVL ENGFNSGNGT IGQGGAIFGR QAYVGLSHKD AGTLTFGRQY SFSTDILGSN YSTGGNTVAG NYAYHVNDID QLTSSRINNA VKFQSANYAG FTFGALYGFS NSTSFAGAPA TTNGTTTTPG SSRAYSFGLN YANGPIGLGA AYTDIRYPGQ AAPAFTTNIA NLTISNVRDL RSFGVGGRYI WGPATLWALW TNTRLEPITG GSTTYNAYEA GGKYAFTPAL SAGVGYTYSR VSGANSGHWN QVNGALDYAL SKRTDVYLLA IYQEASGNNL QAQIGSSTSY FNTSGTGSKN QFAARVGIRH KF
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