Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2119 |
Symbol | gabT |
ID | 3845625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2601894 |
End bp | 2603177 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637839420 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_440307 |
Protein GI | 83718286 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.22947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAATG CCGATCTGCA CGCCCGCAAG AACGCCGCGA CGCCGCGTGG CGTCGGCGTG ATGTGCGACT TCTACGCCGC GCGCGCCGAG AACGCCGAGC TGTGGGACGT CGAGGGCCGC CGCTTCATCG ATTTCGCGGC CGGCATCGCG GTGCTGAACA CGGGCCACCG CCACCCGAAG ATCGTGAAGG CGATCGCCGA GCAGCTCGAG CAGTTCACGC ACACCGCGTA CCAGATCGTG CCGTACGCGT CGTACGTCGA GCTCGCCGAA AAGATCAACG CGCGCGCGCC GATCGCGCAG CCGAAGAAGA CCGCGTTCTT CACGACGGGC GCGGAAGCGG TCGAGAACGC GGTGAAGATC GCGCGCGCTT ACACCGGCCG GCCGGGCGTG ATCGCGTTCG CGGGCGGCTT CCACGGCCGC ACGATGATGG GCATGGCGCT CACCGGCAAG GTCGCACCGT ACAAGATCGG CTTCGGCCCG TTCCCGGGCG ACGTGTTCCA CGCGCCGTAT CCGAACGCGC TGCGCGGCGT GACGAGCGCC GATTCGATCG CCGCCGTCGA AACGCTGTTC AAGGCCGACA TCGATCCGAA GCGCGTCGCC GCGATCATCT TCGAACCGGT GCAGGGCGAA GGCGGCTTCA ACCCGGCGCC CGCCGAGTTC GTGCGCGCGC TGCGCAAGCT GTGCGACGCG CACGGCATCC TCCTCATCGC CGACGAAGTG CAAACGGGCT TCGCGCGCAC GGGCAAGCTG TTCGCGATGG AGCACTACGA CGTCTCGGCC GATCTGATGA CGATCGCCAA GAGCCTCGCG GGCGGGATGC CGCTGTCGGG CGTCGTCGGC CGCGCGGACG TGATGGACGC GGCCGCGCCG GGCGGCCTGG GCGGCACGTA CGCGGGCAAT CCGCTCGCGG TGGCCGCCGC GCACGCCGTG CTCGACGTGA TCGACGAGGA GAAGCTCGCC GAGCGCGCGG CCGTGCTCGG CGACAAGCTG AAGGCGAAGC TCGCCGCGCT GCGCGCCGAC GTGCCGCAGA TCGCCGACGT GCGCGGCCCG GGCGCGATGG TAGCCGCGGA ATTCGTCGAT CCGGACACGC GCGCGTCCGA CGCCGCGTTC ACGAAGCGCG TGCAGACGCT CGCGCTCGAG CGCGGCCTGC TGCTGCTCAT CTGCGGCGTC GACGCGAACG TGATACGTTT CCTGTTTCCG CTCACGATTC AGGATGCCGT GTTCGACGAA GCGCTCGGCA TTCTCGAAAG CGTGCTGAAG GAGGCGGTGG GCGTACCCGC CTGA
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Protein sequence | MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA VLNTGHRHPK IVKAIAEQLE QFTHTAYQIV PYASYVELAE KINARAPIAQ PKKTAFFTTG AEAVENAVKI ARAYTGRPGV IAFAGGFHGR TMMGMALTGK VAPYKIGFGP FPGDVFHAPY PNALRGVTSA DSIAAVETLF KADIDPKRVA AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV QTGFARTGKL FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN PLAVAAAHAV LDVIDEEKLA ERAAVLGDKL KAKLAALRAD VPQIADVRGP GAMVAAEFVD PDTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP LTIQDAVFDE ALGILESVLK EAVGVPA
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