Gene BTH_II1927 details

Gene Information

• Locus tag: BTH_II1927
• Symbol: ahpF
• ID: 3846598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 2341168
• End bp: 2342973
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637839228
• Product: alkyl hydroperoxide reductase subunit
• Protein accession: YP_440121
• Protein GI: 83718356
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3634] Alkyl hydroperoxide reductase, large subunit
• TIGRFAM ID: [TIGR03140] alkyl hydroperoxide reductase, F subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.586969
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGCCG GGCGCCGACA CGCTCACGCC GTCGCTCGAC CTGATCGGCA AGATCTGACG 
CCGCACGGCG GCACCGCCGC CGTATGCGCC GCGCGGCGCC GCGTCGTTCG CGGCCCGCTC 
CCCGCGCCGC TCGCCCCACG TCCGCCCCGC CCGCATACGG CGGGACAGTA CCTCCTTCGC 
TACGGAATCC GAATCGTCAT GCTGGATGCC AATCTCAAGA CTCAGTTGAA ATCGTACCTT 
GAACGGATCA CGCGTCCCGT CGAGCTCGTC GCATCGCTCG ACGACGGCGA CAAGTCGCGC 
GAGCTGCGCG CGCTGCTCGA CGAGATCGCG TCGCTGTCGC CGCAAGTTTT CGTCGTCGAG 
CGCCGCGACG AGGCCGAGCG CGCGCCGTCG TTCTCGGTCG GCGAGCCGGG CGAAGCCGCG 
CGCATTCGCT TCGCCGGGAT ACCGATGGGC CATGAATTCA CGTCGCTCGT GCTCGCGCTG 
CTGCAAACGG GCGGCCATCC GGTGAAGCTC GACGACGCGA CGATCGAGCA AATTCGCGCG 
CTCGACGGCG ACTACACGTT CGAGACGTAT ATCTCGCTCA CCTGTCAGAA CTGCCCGGAA 
GTCGTGCAGG CGCTCAACGT GATGGCGCTC GTCAACCCGC GCATCCGCCA CGTGATGATC 
GACGGTGCGT TGTTCCAGGA CGAAGTCGAC GCGCGCCGGA TCATGGCCGT GCCGACGATC 
TTCCTGAATG GCGAGACGTT CGGCCAGGGC CGCAGCAGCG TGAGGGAAAT CCTCGCGAAG 
CTCGATAGCG GCGCGAGCCG GCGCGCGGCG CAGGCGCTCG CGGCAAAGCC CGTGTTCGAC 
ATGCTGATCG TCGGCGGCGG CCCCGCCGGC GCGGCCGCCG CGATCTACGC GGCGCGCAAG 
GGCATCTCGA CGGGCGTCGT CGCCGAGCGC TTCGGCGGCC AGGTGCTCGA CACGATGGCG 
ATCGAGAATT TCGTGTCGGT GACGGAAACC GAAGGGCCGA AGTTCGCGAC CGCGCTCGAG 
CAGCACGTGA AGCAATACGA AGTCGACGTG ATCGACGTGC AGCGCGCCGA CCGGCTCGTG 
CCGGGCAGTC TCCATGAAAT CCGTCTCGCG AGCGGCGCGG TGCTGAAAGC GAAGGCCGTC 
GTGCTCGCCA CGGGCGCGCG CTGGCGGGAG ATCGGCGTGC CCGGCGAGCG CGAGTATCGC 
AACCGCGGCG TCGCGTACTG CCCGCATTGC GACGGGCCGC TTTTCAAGGG CAAGCGCGTC 
GCGGTGGTCG GCGGCGGCAA CTCGGGCGTC GAGGCGGCGA TCGATCTCGC CGGCATCGTC 
AGTGAAGTGA CGCTGATCGA ATACGGCGCG CAACTGCGCG CGGACGAGGT GCTGCAACGC 
AAGCTGCGCA GCCTCCCGAA CGTGACGGTG CTCACGCACG CGCGCACGAC CGAGCTCGCG 
GGCGACGGCG CGAGGCTCAA CGCGCTCGTC TACGAGGACA TGCGCACGGG CGAAACGAAG 
CGCATCGCGC TCGAAGGCGT GTTCGTGCAG ATCGGCCTCG TGCCGAACAC CGAATGGCTG 
AAGGGAACGG TCGAGCTGTC GAAACACGGC GAGATCGTCG TCGACGCGCG CGGCGCGACG 
TCGGTGCCCG GGGTGTTCGC CGCCGGCGAC GTGACGACCG TGCCGTACAA GCAGATCGTG 
ATCGCGGTCG GCGAAGGCGC GAAGGCGTCG CTCGGCGCGT TCGACTACCT GATCCGAAGC 
GACGCGGATG CGGTGCAGCC GGCGGACGCC GACGCCCCGG CAAGCGCCGA AGTGGTGGCC 
GCCTGA 

 

Protein sequence

MDAGRRHAHA VARPDRQDLT PHGGTAAVCA ARRRVVRGPL PAPLAPRPPR PHTAGQYLLR 
YGIRIVMLDA NLKTQLKSYL ERITRPVELV ASLDDGDKSR ELRALLDEIA SLSPQVFVVE 
RRDEAERAPS FSVGEPGEAA RIRFAGIPMG HEFTSLVLAL LQTGGHPVKL DDATIEQIRA 
LDGDYTFETY ISLTCQNCPE VVQALNVMAL VNPRIRHVMI DGALFQDEVD ARRIMAVPTI 
FLNGETFGQG RSSVREILAK LDSGASRRAA QALAAKPVFD MLIVGGGPAG AAAAIYAARK 
GISTGVVAER FGGQVLDTMA IENFVSVTET EGPKFATALE QHVKQYEVDV IDVQRADRLV 
PGSLHEIRLA SGAVLKAKAV VLATGARWRE IGVPGEREYR NRGVAYCPHC DGPLFKGKRV 
AVVGGGNSGV EAAIDLAGIV SEVTLIEYGA QLRADEVLQR KLRSLPNVTV LTHARTTELA 
GDGARLNALV YEDMRTGETK RIALEGVFVQ IGLVPNTEWL KGTVELSKHG EIVVDARGAT 
SVPGVFAAGD VTTVPYKQIV IAVGEGAKAS LGAFDYLIRS DADAVQPADA DAPASAEVVA 
A