Gene BTH_II1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1900 
Symbol 
ID3845822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2305532 
End bp2307037 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content63% 
IMG OID637839201 
Producthypothetical protein 
Protein accessionYP_440094 
Protein GI83718249 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGC TTGAATCGTC TGCCGAGAAG GTGGTCGTCG ATCAGAACAA TGTCAACGAG 
GATCTGAAGG ACATCCTGCG CCGCTCGTTT CGGCCGCGCA CCAACGAGGC GGCCGAGGCG
GTGCAGAACG CCGTCGAGAC CCTGCTCACG TATGCGCGGC GCAGCCGCGT CGTGGTTCGC
GAGGATGTCG CGCAGACGAT CGAGCAGTTG GTTGCCGAGC TCGACAAGAA GATTTCCGAG
CAACTGACGC TCGTGCTGCA CAACAAGCGC TTCCAGAGTC TCGAAGGCGC ATGGCGCGGA
TTGCACTACC TCGTGTCGAA CACCGACACG AGCGAGAACC TGAAGATCCG CTACCTGAAC
ATCTCGAAAG CGGATCTCGG CAAGACGCTG CGGCGCTTCA AGGGCGTCGT GTGGGACCAG
AGTCCGATTT TCAAGATGAT CTACGAGCAG GAGTACGGCC AGTTCGGCGG CGAGCCGTTC
GGCTGCCTGA TCGGTGACTT CTACTTCGAC CACAGCATGC AGGACGTGTC GATCCTCACC
GAGATGTCGA AGATCTCGGC GGCCGCGCAC GCGCCGTTCA TCGCGGCCGC GGCGCCGGGC
CTGCTGCAGA TGGACGACTG GAGCGAGCTG TCGAATCCGC GCGACGTGTC GAAGATCTTT
ACCGCGACCG AATACGCGTT CTGGCGGCGC CTGCGCGAGA GCAACGACTC GCGCTACCTC
GCGCTCACGC TGCCGCGCTT TCTCGCGCGC GTGCCGTATG GCCCGAAGAC GCAGCCCGTC
GAAGAGTTCG GATTCGAGGA GAAGGTCGAT CCGAACCGCG CCGAGGACTT CTGCTGGGCG
AACTCCGCCT ATGCGATGGG CGCGAACATC ACGCGCGCGT TCAAGACCTA CGGCTGGTGC
ACGAAGATTC GCGGCGTCGA GTCGGGCGGC GCGGTCGAGG TGCTGCCGAA GTTCGTGCTG
CCGTCGCAGG ATCGCGAAGT CGATCTGCAC TGCCCGACCG AAATCGCGAT CTCGGACCGC
CGCGAGCACG AGCTGTCGGA ATCCGGCCTG ATGCCGCTCG TGTATCGGAA GAACTCGGAT
ACGGCTGCGT TCATCGGCGC GAAGACCGTG CACCGTCCGG CAATCTACGA GGACGACGAC
GCGACCGCGA ACTCGAATCT GTCGTCGCGG CTGCCGTACA TCTTCGCGAC GTGCCGCTTC
GCGCACTACC TGAAGTGCAT CGTGCGCGAC AAGATCGGTT CGTTCAAGTC GGCCGAGGAC
ACGCAGCGTT GGCTCAACGA CTGGCTGATG AACTACGTGG ACGGCGACCC GAGCATCTCG
AGCGAGGTGA CGAAATCGCA GCGTCCGCTG TCGGCGGCGG AAGTGGTCGT CGACGAGATT
CCGGAGAACC CCGGCTACTA TCGCGCGCAG TTTTTCCTGC GCCCCCATTT CCAACTGGAG
GGTTTGACCG TTTCTCTCCG GCTGGTTTCG AAGCTTCCGT CGACCAAGCA AGAGGTGACG
ACCTGA
 
Protein sequence
MQQLESSAEK VVVDQNNVNE DLKDILRRSF RPRTNEAAEA VQNAVETLLT YARRSRVVVR 
EDVAQTIEQL VAELDKKISE QLTLVLHNKR FQSLEGAWRG LHYLVSNTDT SENLKIRYLN
ISKADLGKTL RRFKGVVWDQ SPIFKMIYEQ EYGQFGGEPF GCLIGDFYFD HSMQDVSILT
EMSKISAAAH APFIAAAAPG LLQMDDWSEL SNPRDVSKIF TATEYAFWRR LRESNDSRYL
ALTLPRFLAR VPYGPKTQPV EEFGFEEKVD PNRAEDFCWA NSAYAMGANI TRAFKTYGWC
TKIRGVESGG AVEVLPKFVL PSQDREVDLH CPTEIAISDR REHELSESGL MPLVYRKNSD
TAAFIGAKTV HRPAIYEDDD ATANSNLSSR LPYIFATCRF AHYLKCIVRD KIGSFKSAED
TQRWLNDWLM NYVDGDPSIS SEVTKSQRPL SAAEVVVDEI PENPGYYRAQ FFLRPHFQLE
GLTVSLRLVS KLPSTKQEVT T