| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1838 |
|---|
| Symbol | braD |
|---|
| ID | 3846353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2226373 |
|---|
| End bp | 2227299 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637839139 |
|---|
| Product | high-affinity branched-chain amino acid transport system permease protein |
|---|
| Protein accession | YP_440032 |
|---|
| Protein GI | 83716942 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAT TCTTTCCTCA ATTCGCCCAG CAACTGGTCA ACGGCCTCAC GCTGGGCGCG
ATCTACGCGC TGATCGCGAT CGGCTATTCG ATGGTCTACG GGATCATCGG CATGATCAAC
TTCGCCCACG GCGAGATCTA CATGCTCGGC GCGTACATCG GCCTCGTCAC GCTGACCGCG
ATCGGCACGT CGGCGGGCTA TCCGTTGCCG CTCGTGCTTG GCGCGGCGCT CGTCGTGTCG
GTCATCGTCA CGGGGCTCTA CGGGTTCGCG GTCGAGCGCG TCGCGTACCG GCCGCTGCGC
GGCGGGCCGC GGCTCGTGCC GCTCATCTCC GCGATCGGCA TGTCGATCTT TCTTCAGAAC
TACGTACAGA TCGGTCAGGG CGCGCGCGAC ATGTCGGTGC CCGTGCTGAT TTCCGGTGCG
TTCGACATCC GCCTCGGCGG CGACTTCGAC GTGACGGTGC CGTATGCGCG CCTGTTGATC
GTCTGCGTGA CGATCGTGCT GATGATCGCG CTCACGCTGT TCATCTCGCA CTCGCGGATG
GGCCGTGCAT GCCGCGCGTG CGCGGAGGAC ATGCGCATGG CGAACCTGCT CGGCATCGAC
ACGAACCGCG TGATCTCGTT CACGTTCGTG CTGGGCGCGA TGCTCGCCGC GGTGGGCGGC
GTGCTGATCG GGCTCACGAT CGGCAAGCTC AATCCGTACA TCGGCTTCGT CGCGGGCATC
AAGGCGTTCA CGGCCGCGGT GCTGGGCGGC ATCGGCAGCA TTCCCGGCGC GATGCTGGGC
GGCGTGCTGC TCGGCCTTGC CGAGACCTTC GCGTCCGGCT ACATGCCCAC CGAGTACAAG
GACGTGGTGG CCTTCGGCCT TCTCGTGCTG ATCCTGCTGT TCCGTCCGAC GGGCCTGCTC
GGCAAGTCGG ATATCGAAAA GGTGTGA
|
|---|
| Protein sequence | MNEFFPQFAQ QLVNGLTLGA IYALIAIGYS MVYGIIGMIN FAHGEIYMLG AYIGLVTLTA
IGTSAGYPLP LVLGAALVVS VIVTGLYGFA VERVAYRPLR GGPRLVPLIS AIGMSIFLQN
YVQIGQGARD MSVPVLISGA FDIRLGGDFD VTVPYARLLI VCVTIVLMIA LTLFISHSRM
GRACRACAED MRMANLLGID TNRVISFTFV LGAMLAAVGG VLIGLTIGKL NPYIGFVAGI
KAFTAAVLGG IGSIPGAMLG GVLLGLAETF ASGYMPTEYK DVVAFGLLVL ILLFRPTGLL
GKSDIEKV
|
|---|
| |