Gene BTH_II1792 details

Gene Information

• Locus tag: BTH_II1792
• Symbol: macB
• ID: 3846245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 2164835
• End bp: 2166796
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637839093
• Product: macrolide-specific ABC-type efflux carrier
• Protein accession: YP_439986
• Protein GI: 83717068
• COG category: [V] Defense mechanisms
• COG ID: [COG0577] ABC-type antimicrobial peptide transport system, permease component; [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.855927
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAAC CGCTGCTTCA ACTCACGCGC GTCACGCGCC GCTTTCCCGC GGGCGACAAG 
GACGTCGTCG TGCTCGACGA CGTGAGCCTG TCGATCGACG CGGGCGAGAT CGTCGCCATC 
GTCGGCGCGT CCGGCTCGGG CAAATCGACA CTGATGAACA TCCTCGGCTG CCTCGACCAT 
CCGAGCTCGG GCAGCTACCG GGTCGGCGCA CGCGAGACGA GCGAGCTCGA AAGCGACGAG 
CTCGCGCGCC TGCGCCGCGA GCACTTCGGC TTCATCTTCC AGCGCTATCA CCTGCTGCCG 
CATCTGTCCG CGGCCGAAAA CGTCGAAATG CCCGCCGTCT ACGCGGGCAG CGCGCAGGCG 
CAGCGCCGCG AGCGCGCGCT GATGCTGCTC GCGCGCCTGG GCCTGTCCGA TCGCGCCGGC 
CACCGGCCGA GCCAGTTGTC GGGCGGCCAG CAGCAGCGCG TGAGCATCGC GCGCGCGCTG 
ATGAACGGCG GCGAGGTGAT CCTCGCCGAC GAGCCGACGG GCGCGCTCGA TTCGAAGAGC 
GGCCACGACG TGATCCGGGT CCTGCGCGAG CTGAACGCGC TCGGCCACAC CGTCATCATC 
GTCACGCACG ACGAAAACGT CGCCGCGCAC GCGCGCCGCA TCATCGAGAT CAGCGACGGG 
CGCATCGTCG GCGACCGCCT CAATCCGCAC GCGGACGGCG CCGACGCCGC GTCCGGCGCG 
AGCGGCGATG CGGGGCCGCA GCGCGCGCGC CGACTGTCGG CAGGCGTCGG CCGCTTCGCG 
GAAGCGTTCC GGATGGCATG GATCGCGCTC GTATCGCATC GGCTGCGCAC ACTGCTCACG 
ATGCTCGGAA TCATCATCGG GATCACGTCG GTCGTGTCGA TCGTCGCGAT CGGCGAAGGC 
GCGAAGCGCT ACATGCTCGA CGAGATCGGC AGCATCGGCA CAAACACGAT CAACGTCTAC 
CCGGGCGCCG ACTGGGGCGA CAGCCGCGCG GACGCGATCC AGACGCTCGT GCCCGCCGAC 
GCCGCCGCGC TCGCCGATCA GATCTACGTC GACAGCGCGA CGCCCGAGAC GTCGCGCAGC 
CTGCTGCTGC GCTATCGGAA CATCGACGTC AACGCGCTCG TGAGCGGCGT CGGCGAGCGC 
TTCTTCCAGG TTCGCGGGAT GAAGATGGCG CAAGGCATCG CATTCGGCCC CGACGAGGTG 
CGCCGCCAGG CGCAAGTCGC GGTGATCGAC GAGAACACGC GCCGCAAGCT GTTCGGCGCG 
AACCCGAATC CGCTCGGCGA AGTGATCCTG ATCGACAATC TGCCGTGCAT CGTGATCGGC 
GTGACCGCGG CAAAGAAAAG CGCGTTCGGG GACACGAAGA ATCTGAACGT CTGGGTGCCC 
TACACGACGG CGTCCGGACG CCTGTTCGGC CAGCGGCATC TCGACAGCAT CACCGTGCGC 
GTGCGCGACG GCCAGCCGAG CGCCGCGGCC GAGCAAAGCC TGACGAAGCT GATGCTGCAG 
CGGCACGGCC GCAAAGATTT CTTCACGTAC AACATGGACA GCGTCGTCAA GACGGTCGAG 
AAGACCGGGC AGTCGCTCAC GCTGCTGCTG TCGCTGATCG CGGTGATCTC GCTCGTCGTG 
GGCGGAATCG GCGTGATGAA CATCATGCTC GTGTCGGTGA CCGAGCGCAC GCGCGAGATC 
GGCATCCGGA TGGCGGTCGG CGCGCGGCAG GCCGACATCA TGCAGCAGTT CCTCGTCGAA 
GCCGTGACCG TCTGCCTGAT GGGCGGCGCG ATCGGCATCG TGCTGTCGTT GGGCATGAGT 
TTCGTGTTCT CGCTATTCGT CGACCAATGG AAAATGGTGT TCTCGGCCGG CTCGATCGTG 
TCGGCGTTCC TGTGCTCGAC GCTGATCGGC GTCGTGTTCG GCTTCATGCC CGCGCGCAAC 
GCGTCGCGGC TCGATCCGAT CGATGCGCTC GCGCGCGATT GA 

 

Protein sequence

MAEPLLQLTR VTRRFPAGDK DVVVLDDVSL SIDAGEIVAI VGASGSGKST LMNILGCLDH 
PSSGSYRVGA RETSELESDE LARLRREHFG FIFQRYHLLP HLSAAENVEM PAVYAGSAQA 
QRRERALMLL ARLGLSDRAG HRPSQLSGGQ QQRVSIARAL MNGGEVILAD EPTGALDSKS 
GHDVIRVLRE LNALGHTVII VTHDENVAAH ARRIIEISDG RIVGDRLNPH ADGADAASGA 
SGDAGPQRAR RLSAGVGRFA EAFRMAWIAL VSHRLRTLLT MLGIIIGITS VVSIVAIGEG 
AKRYMLDEIG SIGTNTINVY PGADWGDSRA DAIQTLVPAD AAALADQIYV DSATPETSRS 
LLLRYRNIDV NALVSGVGER FFQVRGMKMA QGIAFGPDEV RRQAQVAVID ENTRRKLFGA 
NPNPLGEVIL IDNLPCIVIG VTAAKKSAFG DTKNLNVWVP YTTASGRLFG QRHLDSITVR 
VRDGQPSAAA EQSLTKLMLQ RHGRKDFFTY NMDSVVKTVE KTGQSLTLLL SLIAVISLVV 
GGIGVMNIML VSVTERTREI GIRMAVGARQ ADIMQQFLVE AVTVCLMGGA IGIVLSLGMS 
FVFSLFVDQW KMVFSAGSIV SAFLCSTLIG VVFGFMPARN ASRLDPIDAL ARD