| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1720 |
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| Symbol | |
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| ID | 3846100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2081393 |
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| End bp | 2082595 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637839021 |
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| Product | outer membrane porin OpcP |
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| Protein accession | YP_439914 |
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| Protein GI | 83718226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.34502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GCACAGCGGT CGCGATGACG GCCGCCGGAT TGGCGGCTGT CGCCACCGCG
CACGCTCAGA GCAGCGTGAC GCTTTACGGT ATCGTCGATA ACGGCATCGC GTATCAGAGC
AGCAGCACGT CGCTCGGCTC AACGACGGGC GGCCGCTCGG CGGTGAAGAT GTCGACGGGC
GTGTGGGCGG GCAGCCGCTT CGGCCTGAAG GGCAGCGAGG ACCTCGGCGG CGGCTCGAAG
GCGATCTTCC AGCTCGAATC GGGTTTCAGC ACGGCCAACG GCACGTCGCA GTTCGCGGGC
GGCATCTTCA CGCGGCAGGC GTGGGTCGGC CTGACCAATC CGACGTACGG TACGCTGACG
GCCGGCCGTC AATACACCGC GTACTACACG CTGCTGTCGC CGTACAGCCC GACGACCTGG
CTCACCGGTT ACTTCGGCGC GCACCCGGGC GACATCGACT CGCTCGACAC CAGCTACCGC
ACGAACAACT CGCTCGTCTA CATGTCGCCG AAGTTCTACG GCTTCACGTT CGGCGGCTCG
TATGCGTTCG GCGGCCAGCC GGGCAGCGTG AACGCCGGCT CCACGTGGAG CGCGGGCATC
CAGTACATGA ACGGTCCGCT CGGCATCGCG GCGGCGTTCC AGCGCGTGAA CAACTCGACG
TCGGGCGGCG GCGACTGGGG CGCGAATTCG ACGACGTCCA ACGGCGGCGC GCAGACGGCC
GTGTCGGCGA TCAACAACGG CTACAAGACC GCGCAGGCGC AGCAGCGCGT CGCGGTCACG
GCCGGCTACC AGTTCTCGTC CGCGTGGGAC ATCTCGGTGT CGTACTCGAA CGTGCAGTAC
ATTCCGGGCG TCAACTCGGC GTTCCGCAAC ACCGCGATCT TCAACACGGC GGGTGCGGTG
CTGCACTTCA AGCCGTCCGC TCAGTGGGAC TTCGCGGGCG GCTACGCGTA CACGCGCGCG
ACGCAATCGA ACGGCATCAC GAGCGCGGCG CAGTACCACC AGTTCACGCT GTCGCAGTAT
TACAGCCTGT CGAAGCGCAC GGGCCTTTAC GCGGTCGAGG CGTACCAGCG TGCGAACGGC
AAGACGCTCG CGGGCGGCAA GATCATCGAC GCGACCGCGT CGATCGGCGA CGGCTTCAAC
ACGTCGCCGT CGTCGTCGCG CAGCCAGGTG GGCGTCGGCG TCGGTCTGAT CCATCGCTTC
TGA
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| Protein sequence | MKKRTAVAMT AAGLAAVATA HAQSSVTLYG IVDNGIAYQS SSTSLGSTTG GRSAVKMSTG
VWAGSRFGLK GSEDLGGGSK AIFQLESGFS TANGTSQFAG GIFTRQAWVG LTNPTYGTLT
AGRQYTAYYT LLSPYSPTTW LTGYFGAHPG DIDSLDTSYR TNNSLVYMSP KFYGFTFGGS
YAFGGQPGSV NAGSTWSAGI QYMNGPLGIA AAFQRVNNST SGGGDWGANS TTSNGGAQTA
VSAINNGYKT AQAQQRVAVT AGYQFSSAWD ISVSYSNVQY IPGVNSAFRN TAIFNTAGAV
LHFKPSAQWD FAGGYAYTRA TQSNGITSAA QYHQFTLSQY YSLSKRTGLY AVEAYQRANG
KTLAGGKIID ATASIGDGFN TSPSSSRSQV GVGVGLIHRF
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