Gene BTH_II1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1640 
Symbol 
ID3846704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1924055 
End bp1925287 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID637838941 
ProductDNA-binding protein 
Protein accessionYP_439834 
Protein GI83717624 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0331425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTGA CCATCAGCGA GATCCTGCAA CTGCCCGGTC TCGAAGAGCT CGAACTGCGC 
GCGGGCGAGC GCGGCGTGCA ACGGCCGGTG CGCTGGTACT ACGTCGCGGA GAACGAGGGC
ATCGCCGATT GGGTGATGGG CGGCGAGCTC GTGTTCGTCA CCGGGATCAA TCACCCGCGC
GACGAGGCGA ACCTGCTGCA GTTGATTCGC GAGGGCGCGA GAAGCGGCAT CGCCGGGATG
GTGATCCTGA CGGGCGAGGC GTTCATTCGC CGCATTCCCG ATTCGGTCGC GGCGCTCGCC
GAGCAGCTCG ACATCCCGCT GATCGAGCAG CCGTATCTGC TGAAGATGGT GATCGTCACG
CAACTGATCG GCACCGCGCT CGTGCGCCAC GAGAACACGC TGCGCTCGCA GCGCGACATC
GTGAACCAGT TGCTGACGGG CGATTATCCG AGCATCGACA TCGCGGCTCA TCGCGCGCGC
AACCTGCAGC TCGCGCTCGA TCGGCCGCGC CGCGTCGTCG CGCTGCGGCT CGCAGGCGTG
CCCGCGCTCT TCGACGGCCG CGATCCGGCC ACGGCGGAGG CGCTGCTGCA GGATGCGCGA
CGGACGGTTC AGCGCGGCCT GGACGACTGG CTGCGCGATG AGGACGGCGC GCTGCCGGTG
GTCGAGCAGG GCGAGCTGTT CGTGCTGCTG CTGCCGTGCG ACGATCCGCG CTTCAGGAAG
CAAAAGCTCG CGCTCGGCGC GCTGCGCGAC GCATTGAACC CGCAGATCGG CGCGCTCACG
CTGTTCGTCG GGATCTCGTC GACGGTCGGC GCCGCGCGCC ATTACTGCCG CGGCCTCGCC
GAGGCGCGGC AGGCGCTCGG CGTCGCCGAG GGCATGCGCG CGGGGCAGGG GCTGTGCGAT
TACAGCGAGC TCGGCGTGCT GAAGCTGCTC GCGGCGATCC CCGATCCGAC GCTGATCGAC
GGCTTCGTGA AGGAAACGCT CGGCAATCTG CTCGACAGCA ACCGCAAGCA TCCGACGATG
CTGATCGAAA CGCTCGAAGC GCTGCTTCAG GAAAACGGCA ACGCGATCAA GGCGGCCGAG
CAGTTGTCGA TCCATCGCAA TACGCTTAAC CACCGGCTGC GCAGGATCGA GACGCAGTCG
GGGCAATCGC TCGCCGATCC GTATTTTCGG TTGAACGCGT CCGTCGCGCT GCTCGCGTGG
CGGATGTCGG ATACGCAACG ACAGGAGTTC TGA
 
Protein sequence
MSLTISEILQ LPGLEELELR AGERGVQRPV RWYYVAENEG IADWVMGGEL VFVTGINHPR 
DEANLLQLIR EGARSGIAGM VILTGEAFIR RIPDSVAALA EQLDIPLIEQ PYLLKMVIVT
QLIGTALVRH ENTLRSQRDI VNQLLTGDYP SIDIAAHRAR NLQLALDRPR RVVALRLAGV
PALFDGRDPA TAEALLQDAR RTVQRGLDDW LRDEDGALPV VEQGELFVLL LPCDDPRFRK
QKLALGALRD ALNPQIGALT LFVGISSTVG AARHYCRGLA EARQALGVAE GMRAGQGLCD
YSELGVLKLL AAIPDPTLID GFVKETLGNL LDSNRKHPTM LIETLEALLQ ENGNAIKAAE
QLSIHRNTLN HRLRRIETQS GQSLADPYFR LNASVALLAW RMSDTQRQEF