| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1578 |
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| Symbol | |
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| ID | 3844676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1849092 |
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| End bp | 1850900 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637838879 |
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| Product | collagenase, putative |
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| Protein accession | YP_439773 |
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| Protein GI | 83717827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.285851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCA TGCCGCAGAA TCTGCCGGTT TCACCCGAGC AGGCCGAGTA CAACCTGCCG
CTCAGCGAGC AGGACCGGGC GGCGTTGACC AAGCCTTCGC AGCTCAAGCA GCAGGCCAAG
CGCAGCAAGC GCAGCGCGCC GGGCGCCGAT TGCCGCGACA TGTCGGCGAT GACGCGGTAT
CGCGGCGCGG CACTCGCCGA TTACATCGCG AATCTTCCCG ATTACGAATG CCATTACGGC
TTGTTCTCAG TCGATAAAAC GCTGGCTCAG CAGATTTTCA ATGCCGAAAA CGTGCATGCC
GTCGCGAGCC GTTTTGTGCA GGAAGTCTAT CGCTATGATG CGAGCAATTT GATTCTGGTC
AATTTGCTGA TTTATCTGCG TTCCGCTTAT TACCAATATG ATGTATCGGG CATTGCCGAT
CCGATTCCGG ATCTCGCCGT GTGGCTGCGT CCGTATATCA AGCAAAGCCT CGAAGGCGAG
GCGCTCTATC GCGAGAACGA CCGCGCGCCG AGCACGGCGA ACGAGCTGAT GAAGCTCATC
ACGAACATGA AGGACGAGGC GTACTATCTG CCGACGCTGA AGAACCGCAT CGCGTCCTAC
ACGGCGAGCG CGACGAATCC GCAGGCGGCG GCGCCGCTGT TGCAGCGCAG CGCGGCGGGC
GGCTTCACCG GCTTGCTCAC GGTGTTCTTC TACGCGCATC AGCGCAGCGG CGCGCGGCAG
ATGCTCGACA GCGACGCGAC GCTGCCGGAG ACGCTCAACC GCTTCGTCAC CGCGAACCGA
GCGAGCCTGT CGAATACGAG CGCCGCGTAT CAGCTTGCCG ACGCCGCACG CGAGACGTTT
CGCTTTCTCC GTTATCCGAC GCAGAAGCCG CGCGTGAAGA AGATGATCCA GGACATCCTG
GCATCGACGA GCCTGACGGG GGCGGACAAC GATCTGTGGC TCGCGGCGGC GGAAGCGGTC
GACTACGGCG ACGCGGGCAA CTGCGCGGAC TACGGCACGT GCGACTACAA GAAGCGGCTG
ACCGATGCGG TGCTCACGCA TCGTCACGCA TGCAACGCGA GCGTGCGCAT TCTCGCGCAG
GACATGACGG CGCCGCAGTT GCAGTCGGTC TGCGCGGCGG TCGCGCAGCA GGACGATTAC
TTCCACCGGA TGATGAAGAC CGGGCGCAAG CCGGTCGCGG GCGATCGCAA CGACACGATC
GAACTCGTCA TCTTCGACGA CTACGCGAAC TATCGCAAAT ACGCTTCGGT GATCTACGGC
ATCAGCACCG ACAACGGCGG CATGTACCTC GAAGGCGATC CGTCCGCGCC CGGCAACCAG
GCGCGCTTCA TTGCCCATGA GGCGTCGTGG CTGCGGCCCG AGTTCAAGGT CTGGAACCTC
GAGCACGAGT TCACGCACTA TCTGGACGGC CGCTACGACA TGGCGGGCGA CTTCGCGGCG
AGCACCGCGA AGCCCACCGT CTGGTGGATC GAAGGCGTCG CCGAATATCT GTCGAGAAAG
AACGGCAACC AGGAGTCGAT CGACGCGGCG CGCACGGGCG CGTACCGGTT CGCGGACGTG
CTCGGCACGC TGTATTCGTC GAGCGACTAC GTCGCGCGCG CATACCGGTG GGGCTACATG
GCGACGCGCT TCATGTTCGA GCGCCACCGC GCGGACGTCG ACACGATCGT GTCGCGCTTC
CGGGCGGGCG ATTACGACGG CTACGCGAAC TACGTCGCGT ACATCGGCAA CCGCTACGAC
AACGAGTTCG TCGACTGGGC GCGCAACGCG ACGACGGCGG GCGAGCCGCC GCTGCCGACG
CAGCGCTGA
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| Protein sequence | MPRMPQNLPV SPEQAEYNLP LSEQDRAALT KPSQLKQQAK RSKRSAPGAD CRDMSAMTRY
RGAALADYIA NLPDYECHYG LFSVDKTLAQ QIFNAENVHA VASRFVQEVY RYDASNLILV
NLLIYLRSAY YQYDVSGIAD PIPDLAVWLR PYIKQSLEGE ALYRENDRAP STANELMKLI
TNMKDEAYYL PTLKNRIASY TASATNPQAA APLLQRSAAG GFTGLLTVFF YAHQRSGARQ
MLDSDATLPE TLNRFVTANR ASLSNTSAAY QLADAARETF RFLRYPTQKP RVKKMIQDIL
ASTSLTGADN DLWLAAAEAV DYGDAGNCAD YGTCDYKKRL TDAVLTHRHA CNASVRILAQ
DMTAPQLQSV CAAVAQQDDY FHRMMKTGRK PVAGDRNDTI ELVIFDDYAN YRKYASVIYG
ISTDNGGMYL EGDPSAPGNQ ARFIAHEASW LRPEFKVWNL EHEFTHYLDG RYDMAGDFAA
STAKPTVWWI EGVAEYLSRK NGNQESIDAA RTGAYRFADV LGTLYSSSDY VARAYRWGYM
ATRFMFERHR ADVDTIVSRF RAGDYDGYAN YVAYIGNRYD NEFVDWARNA TTAGEPPLPT
QR
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