| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1489 |
|---|
| Symbol | |
|---|
| ID | 3845801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1756063 |
|---|
| End bp | 1758558 |
|---|
| Gene Length | 2496 bp |
|---|
| Protein Length | 831 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637838791 |
|---|
| Product | Hep_Hag family protein |
|---|
| Protein accession | YP_439685 |
|---|
| Protein GI | 83717995 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
|---|
| COG ID | [COG5295] Autotransporter adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.500286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAAA TCTACAATGT TGTCTGGAGT CGGGTGCGAG GCCAATTGAT TGCGGTTTCC
GAATTTGCCG GATCGAATGG CAAGGGTCCG ACGACGCGAG TCGTCACGGC GGCGTCCGGC
GTCGCCGCGC GTCATGCGGC CTCGGGCCGG TCGCGCCCGT CATGGGCGAA GCTCGGCCTG
ATGTCGCTTG CGGTGAGCGC GGCGATGGGC GGGATCGCGG CCGACGCGGT GGCGCAGGTC
AGCTATGCGG CGGGCTTTAA CGCCTATGCC GGCCCCGGCG GCAATACCGG CTCGTGGGCG
TTCTACAACC CGGCCTTCAG CGCGGGCGCG CTGCTGTACG GAACGGCGGT CGGCAACTAC
GCGTATGCGA ACGGCGAGGG CAGCTCCGCC TACGGCGATC ACGCGACCGC GAAGGGGCGC
ATCGGCACCG CGCTCGGCGC CTATGCGGAA GCAGCCGGCG ACGGCAGCAA TGCATTCGGT
GCGAGCGCAC GGGCGCTGCC GGACTTCAGC ATCGCGATCG GCACGAACGC GCAGGCGCTG
AAGGACATGG GGCAATCGAT CCCCGGCCGC GAAGACATCG GCACGATCGC GATCGGCGCT
AACTCGATCG CGCAGGGTGA CAACAGCGAT CCGCTGCACG TGTCCGCGCC GAATGCGTTC
GGCGGCTACA CGAGCGCGAC GGCGAGCGGC GCCGTGGCGC TGGGCGAAGG CGCCGCGTCG
TCCGCGTATT ACGCGAACGC GCTGGGCTCG TATTCGAAGG CGTCGGGTGC GGGCGCCGTC
GCGGTCGGCG GCGGCGCCGA GGCGACCGCG CAAGGCGCGG TGGCGATCGG CGGCGCGACG
AGCGTCAATA ACGCGACCGC GCTGTCCGGC TATGCGAGCG CAAGCGGCAT CAACGCCGTC
GCGATTGGTT CCGGCGCGCA GGCAACGGGC AGCCAGTCGA TCAGCATCGG CACGGGCAAC
GTCGTGTCGG GCGCGAACGC CGGTGCGTTC GGCGATCCGT CGACGGTCAC GGGCACGGGT
TCGTATTCGT TCGGCAACAA CAACACGATC AACGCGAACA ATGCGTTCGT GCTCGGCAGC
AACGTGACGA TCGGCTCGGG TCTCGACGGT TCGGTCGCGC TTGGCAACGG TACGACGGTT
GCGGCGGCGA ACCCGACCAG CAGCGCGACG ATCACGACGA CGTCGGGCGG CCAGCTGACC
CTGTCCGGCT TCGCAGGGGC GAATCCGACG AGCGTCGTCA GCGTCGGCGC ACCCGGTGCC
GAGCGCCAGA TCACGAACGT CGCGGCGGGG CGCATCACGC CGACGTCGAC GGACGCCGTC
AACGGCAGCC AGCTGTATGC GGTCGCGAGC ACGATCGACA ACGCGGTGAA CGGCGGCGGG
ATCAAGTACT TCCACGCGAA TTCGACCTTG CCCGATTCGA CGGCGGCGGG CACTGACAGC
GTCGCAGTCG GGCCGGCCGC GCTCGCCTAC GGCAACGATT CGATCGCCGA AGGCACGAAC
GCGACGGCGG GCGTGAGCGG CAATCCGGCG GTCTCGGGCG ACGTCGCGCT CGGCAGCGGC
GCGCAGGCGA CGGGCGGACG ATCGCTCGCG CTCGGCGCGA ACGCATCGGT CAACACCGCG
GGCGGCGTCG CGCTCGGCGC CGGGTCGGTG GCGAATCGCG CGGCCGGCAC GTACACCGAT
CCGATCACGG GCGGCAGCTT CACGACCGCA TTCGGCGCGG TATCGGTCGG CCTCGAAGGA
TCGCTGCGCC AGATCACCAA CGTCGCGGCG GGCACGCAGG CGACGGACGC GGTGAACGTC
GGCCAGCTGC AAGGCGCGAT CGCGCAGCTG AACCAGTCGA TCCAGAACAT CACGAACGGC
TCGAACTCGG GCAGCAACGG GGGCAATGGA AACAACACCG GGCAGAACGT GTCGGGCCAG
TGGATCACGG GCAATCCGTC GACCTACACG CCGCCCGTGG CGAGCGGCAT CGGCTCGACC
GCCGCGGGCA GCGGCAGCGT CGCGTCCGGC GCGAACAGCG TCGCGATCGG CGACGGCGCG
TCGGCGTCCG GCAACAACTC GGTCGCGCTC GGCGCCAATT CGGTCGCGAG CGCGCCGAAT
ACGGTGTCGG TCGGCTCGGT CGGCAACGAG CGGACGATCT CGAATGTCGC GCCGGGCGTG
AACGGCACCG ATGCGGTGAA CGTGAACCAG TTGAACAGCG GCATCGGCAA TGCGGTCGGC
CAGGCGAATC AGTACACGGA TCAGAAGGTC GACCATCTGC GGCGCGAGAT GAACGGCGGC
GTGGCGGCGG CGATGGCGGT GGCAGGCTTG CCGCAGCCGA CCGCGCCGGG CAAGAGCATG
GTCGCGATCG CGGGCTCGAC GTGGCAAGGG CAGCAAGGCT TCGCGCTCGG TGTATCGACG
ATTTCCGAGA ACGGCAAGTG GCTGTACAAG GGCTCGCTCA CGACCAGCAC GCGCGGCGGC
ACGGGCGCGG TGCTCGGGGC AGGCTATCAG TGGTGA
|
|---|
| Protein sequence | MNKIYNVVWS RVRGQLIAVS EFAGSNGKGP TTRVVTAASG VAARHAASGR SRPSWAKLGL
MSLAVSAAMG GIAADAVAQV SYAAGFNAYA GPGGNTGSWA FYNPAFSAGA LLYGTAVGNY
AYANGEGSSA YGDHATAKGR IGTALGAYAE AAGDGSNAFG ASARALPDFS IAIGTNAQAL
KDMGQSIPGR EDIGTIAIGA NSIAQGDNSD PLHVSAPNAF GGYTSATASG AVALGEGAAS
SAYYANALGS YSKASGAGAV AVGGGAEATA QGAVAIGGAT SVNNATALSG YASASGINAV
AIGSGAQATG SQSISIGTGN VVSGANAGAF GDPSTVTGTG SYSFGNNNTI NANNAFVLGS
NVTIGSGLDG SVALGNGTTV AAANPTSSAT ITTTSGGQLT LSGFAGANPT SVVSVGAPGA
ERQITNVAAG RITPTSTDAV NGSQLYAVAS TIDNAVNGGG IKYFHANSTL PDSTAAGTDS
VAVGPAALAY GNDSIAEGTN ATAGVSGNPA VSGDVALGSG AQATGGRSLA LGANASVNTA
GGVALGAGSV ANRAAGTYTD PITGGSFTTA FGAVSVGLEG SLRQITNVAA GTQATDAVNV
GQLQGAIAQL NQSIQNITNG SNSGSNGGNG NNTGQNVSGQ WITGNPSTYT PPVASGIGST
AAGSGSVASG ANSVAIGDGA SASGNNSVAL GANSVASAPN TVSVGSVGNE RTISNVAPGV
NGTDAVNVNQ LNSGIGNAVG QANQYTDQKV DHLRREMNGG VAAAMAVAGL PQPTAPGKSM
VAIAGSTWQG QQGFALGVST ISENGKWLYK GSLTTSTRGG TGAVLGAGYQ W
|
|---|
| |