| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1436 |
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| Symbol | |
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| ID | 3846227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 1699271 |
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| End bp | 1701256 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637838738 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_439632 |
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| Protein GI | 83718180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.064161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGT CCGATATTGC GGGTTTCCTG AGTCTGCAAA ACAGCCGCCT GCTGACGATC
AAGACGCCGC TTGCCGGGCG CGCCGAGCTG GTGCTCAGCG ATTTCCAGTG CAGCGAGGGC
TTGTCGGTGC TGTTCGACAT GCGGCTGGGG CTTGCGTCGC GCGATCCGAC GATCGAACTG
AAGCAGATGA TCGGCCAGGC CGTCACGATA TCCCTTCAGC CCCCAGGCGG GATCGTCGGC
GGTTCCGCCC GGCATTTTCA CGGTTACGTC ACGCAGTTTT CGCATACCGG CGCCGACGGC
GGGCTCGCCA CCTATAGCGC GACTGTGCAG CCGTGGCTAT GGATGCTGTC GCGACGGGTG
GATTCGCGAA TATTCCAGGA CAAGAGCGCA CGCGACATTC TCGACGAGGT GTTTTCGCAA
TATTCGGCGC TCGCTTCCTA CGAATTCCGC GCCGGCCGCA CGCTGAAGCC GTACAGCTAT
TGCACGCAGT ACCGGGAGAC GGATCTGAAT TTCGTGCTGC GCCTGATGGA GCTGGAAGGG
CTCTTTTTCT ATTTCGAGCA CGCGGAGGAC GGACACAAGC TGATCATCGA CGACGATTCG
ACCCGTGCAA AGCCCATCGA CGGGCTGCCG TCGCTGCGGT ATGCGAGCGG CGAGATTCTC
GAGGACGAAG CGGTGGTCAC GCAATGGGCG GCGCAGCGGC AACTCATGTC CGGCGCTGTC
AGCATGAAGG CTTATGACTA CAAAGTGCCT GCCGCCCGCC GCTACGTATC GGGCGAGTCG
GATTTCAATC AGGGCGAGGT CGAGCGGTAT GAAATCTACG ACTACGTCGG GCTGCATGGT
TTCGATTCGA CCGACCGGGG CGAGGAACTG GCGCGATTCA GGCTGGAATC GCTCGCCGCG
AGCGGCAAGA CCTTTTCGGG CACGAGCACC GGCAGGACGC TCGCGCCGGG CCGCTATTTT
GAATTGAGCG CGCATTACGA TCACGACAAC GGCCCGATGC ATGACCGCCA GTTCCTGTTG
ACGAATGTCC GCCACCATGG CGTCAACAAT TATCAGTCTA ACGAAGGATC GGGGTCGTAC
CACGCCAGCT TCCAGTGCAT CCGCAAGAAG ATTCCGTTTC GGCCGCCGCT CGCGCATGCG
CGGCCCGTCA TTCCGGGGCC GCAGACCGCG ATCGTCGTGG GGCCGAAGGG CGAGCAAATT
CATACCGATG CGCTGGGGCG AGTGAAGATC CAGTTTCATT GGGACCGCAT CGGGCAGCGC
AATCAAGGCA GTTCGTGCTG GGTGCGGGTG AGCCAGCCGT GGGCGGGCGG CGGGTTCGGC
TCGGTGCAGA TTCCGCGCAT CGGCGACGAG GTGGTGGTCA CGTTCCTCGA CGGCAATCCG
GATCGCCCGC TGATCCTATC GAGCGTCTAT AACGCGCAGA ACATGCCGCC GTGGGCGCTG
CCGGCGGGCG CGACGCAAAG CGGGTTCCTC ACGCGCTCGC ACAAGGGGAC GTCCGAGAAC
GCCAACGCGA TTCGCTTCGA GGACAAGCTG GGCGAGGAAG AAATCTGGCT GCATGCGGAA
AGGAATCAGC GCATCGAGGT CGAGCACGAC GAATCGCACA CCGTCGGCGC GAAGCGGACC
AAGACGATCG GCGCGGACGA GATCGTCACG ATCGGCGGCG CGCAGACCCA CACGATCACG
GGCGCGCGCA CGCAGACGAT CGGCGCAGAC CATACGCAGA CCATCAAGGG CGCGCACAAG
CAGAACGTCG CCGGCACGCA TGCCCAGGTC ATCGGCGGCA ACGCGTCGAT CACGACCACG
GGGCCGCAGC CGGGCGCCGC CGGCACCGTC GGAGATATCG AGATCCAGTC GAGCCAGGGG
AAGATCCATC TCAAGGCGGC GACGGAAATC GTCATCGAAG TGGGGGCGAG CGTGATCCAT
CTGAAGGCGG ACGGCACGAT CGAGATCAGC GGCCCGACGC ATATCGGGCT GAATTCGAAG
AGCTGA
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| Protein sequence | MKMSDIAGFL SLQNSRLLTI KTPLAGRAEL VLSDFQCSEG LSVLFDMRLG LASRDPTIEL
KQMIGQAVTI SLQPPGGIVG GSARHFHGYV TQFSHTGADG GLATYSATVQ PWLWMLSRRV
DSRIFQDKSA RDILDEVFSQ YSALASYEFR AGRTLKPYSY CTQYRETDLN FVLRLMELEG
LFFYFEHAED GHKLIIDDDS TRAKPIDGLP SLRYASGEIL EDEAVVTQWA AQRQLMSGAV
SMKAYDYKVP AARRYVSGES DFNQGEVERY EIYDYVGLHG FDSTDRGEEL ARFRLESLAA
SGKTFSGTST GRTLAPGRYF ELSAHYDHDN GPMHDRQFLL TNVRHHGVNN YQSNEGSGSY
HASFQCIRKK IPFRPPLAHA RPVIPGPQTA IVVGPKGEQI HTDALGRVKI QFHWDRIGQR
NQGSSCWVRV SQPWAGGGFG SVQIPRIGDE VVVTFLDGNP DRPLILSSVY NAQNMPPWAL
PAGATQSGFL TRSHKGTSEN ANAIRFEDKL GEEEIWLHAE RNQRIEVEHD ESHTVGAKRT
KTIGADEIVT IGGAQTHTIT GARTQTIGAD HTQTIKGAHK QNVAGTHAQV IGGNASITTT
GPQPGAAGTV GDIEIQSSQG KIHLKAATEI VIEVGASVIH LKADGTIEIS GPTHIGLNSK
S
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