| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1129 |
|---|
| Symbol | |
|---|
| ID | 3845608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1311610 |
|---|
| End bp | 1312905 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637838432 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_439326 |
|---|
| Protein GI | 83716478 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00552424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCGTCGAGCG CGGCGCCACG GCCGCGCCGC ACCACGCAGG CTCGCTCACG
ATCCTTCAGG GCACCGCGCT CTACATCGGC GCGGTGCTCG GCACCGGCGT GATCGCGCTG
CCCGCGCTCG CGGCCGAAGT CGCGGGCCCC GCGTCGCTGC TCGCGTGGGC GGCGCTCGTC
GTGCTGTCGA TCCCGCTCGC CGCGACCTTC GCCGCGCTCG GCGCCCGCTA CGCGGACGCG
GGCGGCGTAT CGACCTACGT GCGCAACGCG TTCGGCGCGA AAGCGGCGGC CGTCGTCGGC
TGGTGCTTCT ATTTCGCGGT GCCGGCCGGC GCGCCCGCCG CCGCGATGTT CGGCGGCGCG
TACGTCGCCG CCGTCACGGG CGGTGGACAC GCAACGATGA TCGCGTCGGC GGCGGCGCTG
ATCGCGATCG TCGCGGCCGC GAACGCGTTC GGCGTCACCG TGTCGGGACG CATGCAGCTC
GTGCTGTCCG CGTTGCTCGT CGCGCTGCTC GTCGCCGCCG TGCTCGCGTC CGCGCCGCAC
GCGCGCGCGG CGAACCTGCA TCCGTTCGCG CCGCACGGCT GGCTCGCGGT CGGTCAGGCC
GCCGCGCTGC TCGTCTGGAG CTTCGCGGGC TGGGAAGCGA TCACGCATCT CGCGGCCGAG
TTCCGGCGGC CCGCGCACGA CTTGCCGCGC TCGACCGGCA TCGCGGTCGC GGTGGTCGGG
CTGCTGTACC TGTCGGTCGC GGCCGCGAGC GTGCTCGTGC TCGGGCCCGC GGCGGGCACG
TCCGGCGCGC CGCTCGCGGC GCTGATCGCG CGCGGAATCG GCGGCAACGC GCAATTGATC
GCGACGGCGG CCGCGCTGCT GCTCACGCTC GGCACGATGA ACGCGTACTT CGCGGGCGCG
GCGAAGCTCG GCGCCGCGCT CGGCCGCGAC GGCGCGCTGC CCCGCTGGTT CGCGCAAGGC
AGCCAGACGG GCGGCGTGCC GCGGCGCAGC CTCGCGGTCC TCGCGGCGCT CGCCGGCTGC
GCGCTCGCGG CGACCGTCGC GACGGGCACG GGGCCGAAGC CGCTCGTGCT CGCGACATCC
GGCAATTTCG TGATGGTCTA CGTGCTCGGC TCGGCGGCGG CCACGAAGCT GCTGCCGCGC
GGCGGGTTCG CGCGTCGCGC GTCGGTCGTC GCGTTCCTGT CGTCGCTCCT GCTGCTCGCG
ACGACGGGCT GGTATCTGCT GTGGCCGCTG CTGCTGACGG CGGCGGCAAT CGGGTATCTC
CGCGTGACGG ACAAGCGAAC GGCGGCGAAG CGCTGA
|
|---|
| Protein sequence | MNAPVERGAT AAPHHAGSLT ILQGTALYIG AVLGTGVIAL PALAAEVAGP ASLLAWAALV
VLSIPLAATF AALGARYADA GGVSTYVRNA FGAKAAAVVG WCFYFAVPAG APAAAMFGGA
YVAAVTGGGH ATMIASAAAL IAIVAAANAF GVTVSGRMQL VLSALLVALL VAAVLASAPH
ARAANLHPFA PHGWLAVGQA AALLVWSFAG WEAITHLAAE FRRPAHDLPR STGIAVAVVG
LLYLSVAAAS VLVLGPAAGT SGAPLAALIA RGIGGNAQLI ATAAALLLTL GTMNAYFAGA
AKLGAALGRD GALPRWFAQG SQTGGVPRRS LAVLAALAGC ALAATVATGT GPKPLVLATS
GNFVMVYVLG SAAATKLLPR GGFARRASVV AFLSSLLLLA TTGWYLLWPL LLTAAAIGYL
RVTDKRTAAK R
|
|---|
| |