Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1080 |
Symbol | |
ID | 3846528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 1257179 |
End bp | 1258840 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637838383 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_439277 |
Protein GI | 83717604 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.10212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCGC GGGCGCGGCG GCGCGCGAGC CGGTGCGGCA GGAATGAACG GAACGGGCCG CGGCGGGATA CCGGAAAGCA AGAAGGACGC ATCATACGAA TGACGCAGAC AGCAACGCAA GCAGCCACTC GCGCGATGAT CGCGACAGGA AGCCGCGCGG CGCGCCGGCT CGCGGCAGCC GCGCTCGCGT GGGCGCTCGC CGGCTGCGTG CCGTCGGGCT TCGAGCCGGC GCTCGCGCCG CGCACGCCGG GCGACGACGC GCTCGCGCAC ACGGCGGGGG GCGCCGCGCA CGGCGCATGG CCGAGCCCCG ACTGGGTCCG GCAGCTCGGC GATCCGCAAC TCGACGCGCT CGTCGACGAG GCGCTGCGGC AGAACCCGAC GCTGCAGGCC GCGCAGGCGC GCATCGGCGT CGCGCAGTCG CAGCTGCAGC AGTTCGAATC GCTGACGGGG CTCACCGCGA CGGCGGGCGC GTCGCTCTCC AAGGCGCACG TGCCGCGCTC GGGCGGCACC ATCAATACGA CGTTCAACGG CTTGCCGGTG TCGGTGCCGC TCGTCGGCGA ATCGGTGGTG TCGTCGTCGT CGCTGTTCGT CGGGCTGAAC TATCAGCTGG ACCTGTGGGG CAAGAACGCG GCGGCCACGC GCGGGCTGCT GTCGATGCGC GATGCGGCGC GCGTGGAGGC CGAGCAGGCG CGGCTCGCGC TGTCGGTGGC GATCGTGACG CTGTACGGCG AGCTGGACCG CGCGTATGCG CTGCGCGAGC TGCTGCAGCA GAAGCGCCGC GCGAGCGAGC AGGTGGAGAC GGTGCTGCGC GAGCGCGCGG CGCGCGGGAT CGACAACGGC TACGATGCGG ACGACGCGGC GCTCAAGCGG GGCAAGCTGC TCGAGCAGCT CGCGCTGACC GACGAGCAGA TCCAGTTGCA GAAGCTGCAA CTGGGGGTGC TGAGCGGGCG GGGGCCGGAG CGCGGGCTGT CGCTCGCGCG GCCGAAGCTC GCGCCGCTCG CGGACGCGCC GCTGCCGGCG CGGCTGCCGG CCGGGCTGCT GGGGCGGCGG CCGGACATCG TCGCGGCGCG GCTGCGGGTG GAGGCGGCGT ACGCGGCGAT CGACGGCACG CGCGCGTCGT TCTACCCGGA CGTGAACCTG GCGGCGCTGG GCGGGCTGTT CGCGCTCACG CCGGCGTCGC TGTTCAAGCA CGATGCGCTG GGGGGCTCGA TCGGTCCGGC GCTGTCGCTG CCGATCTTCG ATCGCGGCCG GCTGAAGGCG AAGCTGGGGG GCGACGTGGC GAACGCGGAC GTGGCGCTGG CGCTGTACAA CCAGACGGTG GATGCGGCGC TGGGCGAGGT GGCGCGGCAG TTGACGTCGC TGTCGACGGT GGATGCGCTG CTCGAGGCGC AGCAGCAGGC GGTGCGCTCG GCGCAGCGGA TGGTGGCGCT GGCGCAGGAC CGGCACCGGC GGGGGATGGG GATGCGCAAG GACGTGAACG TGGCGAAGCT GACGCTGCTG GACGAGCGTG CGCACGTGAT CGAGCTGCAG GCGCGGCGGC GGACGCTGCG GGTGGGGCTG ATCGGGGCGC TGGGCGGCGG CTTCGACGCG CGGCCGGCGG GCGGCGCGCC GCTCGCGCAG GGCAAGCCGT TCGCGGCGGC GAGCGACAGG CCGCCCGATT GA
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Protein sequence | MRARARRRAS RCGRNERNGP RRDTGKQEGR IIRMTQTATQ AATRAMIATG SRAARRLAAA ALAWALAGCV PSGFEPALAP RTPGDDALAH TAGGAAHGAW PSPDWVRQLG DPQLDALVDE ALRQNPTLQA AQARIGVAQS QLQQFESLTG LTATAGASLS KAHVPRSGGT INTTFNGLPV SVPLVGESVV SSSSLFVGLN YQLDLWGKNA AATRGLLSMR DAARVEAEQA RLALSVAIVT LYGELDRAYA LRELLQQKRR ASEQVETVLR ERAARGIDNG YDADDAALKR GKLLEQLALT DEQIQLQKLQ LGVLSGRGPE RGLSLARPKL APLADAPLPA RLPAGLLGRR PDIVAARLRV EAAYAAIDGT RASFYPDVNL AALGGLFALT PASLFKHDAL GGSIGPALSL PIFDRGRLKA KLGGDVANAD VALALYNQTV DAALGEVARQ LTSLSTVDAL LEAQQQAVRS AQRMVALAQD RHRRGMGMRK DVNVAKLTLL DERAHVIELQ ARRRTLRVGL IGALGGGFDA RPAGGAPLAQ GKPFAAASDR PPD
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