| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1077 |
|---|
| Symbol | |
|---|
| ID | 3845460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 1254556 |
|---|
| End bp | 1256127 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637838380 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_439274 |
|---|
| Protein GI | 83716584 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0476678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC AGGCGATGTC GGCGGATCAG GCGGGCGTTG CGCCGCCGGC GGCCGCCCCG
CTGCGCGGCG CGAAGCTCGC GCTGCTGACG TTCGCGCTGT CGCTCGCGAC GTTCATCGAA
GTGCTGGATT CGACGGTGGC GAACGTGGCG GTGCCGGCGA TCTCGGGCAG CCTCGGGGTG
TCGAACAGCC AGGGCACGTG GGTGATCAGC TCGTACTCGG TGGCCGCGGC GATCGCGGTG
CCGCTGACGG GGTGGCTTGC GCGGCGCGTG GGCGAGCTGA GGCTGTTCGT GGCGTCGGTG
ATCCTGTTCA CGCTGACGTC GCTGCTGTGC GGGCTCGCGC GGGACCTGGA GGTGCTGGTT
GCGTGCCGGG CGCTGCAGGG GCTGTTCTCG GGGCCGATGG TGCCGCTGTC GCAGACGATC
CTGATGCGCG CGTTCCCGCC GGCGCGGCGC ACGCTGGCGC TGGCGCTGTG GGGGATGACG
GTGCTGCTCG CGCCGATCTT CGGGCCGGTG GTGGGCGGCT GGCTGATCGA CAACTTCTCG
TGGCCGTGGA TCTTCCTGAT CAACCTGCCG ATCGGGCTGT TCTCGTTCGC GGTGTGCACG
CTGATGCTGC GCCCGCAGGC GCAGCGCGGC GAGGCGAGCC CGATCGACGC GCCGGGGATC
GTGCTGCTGG TGATCGGGGT GGGCTCGCTG CAGGCGATGC TGGACCTGGG GCACGACCGG
GGCTGGTTCG ATTCGCCGCT GATCACGGCG CTGGCGATCG CGGCGGGGGT GTCGCTCGTG
TCGCTGCTGA TCTGGGAGCT GGGCGAGGCG CATCCGGTGG TGGATCTGAG CCTGTTCCGG
GAGCGGACCT TCACGTTCTG CGTGGTGATC ATCTCGCTGG GGATGATGAG CTTCTCGGTG
GTGGGGGTGG TGTTTCCGCT GTGGCTGCAG GCGGTGATGG GATACACGGC GTACCAGGCG
GGGCTGGCGA CGGCGTCGAT GGGGGTGCTG GCGCTGGTGT TCTCGATCCT GGTGGGGCTG
TACGCGAGCC GGGTGGACGC GCGGGTGCTG GTGACGTTCG GGTTCGGGGT GTTTGCGGCG
GTGATGTGGT GGAGCACGCA CTTCACGCTG TCGATGACGT TCGCGCAGGT GGTGACGCCG
CGGCTGATTC AGGGGATGGG GCTGCCGTGC TTCTTCATAC CGCTGACGGC GGCGACGCTG
TCGCGGGTGC CGGACGAGAA GCTGGCGGCG GCGTCGAGCC TGTCGAACTT CCTGCGGACG
CTGTCGGCGG CGTTCGGCAC GGCGCTGAGC GTGACGTGGT GGGACAACCG GGCGACGTAC
CACTACGCGG TGGTGTCGCA ATCGGTGACG CGCGCCTCGG AGAACACGCA GCGGTACGTG
GACGCGCTGC ACGCGATGGG GCTGCACGGC GCGCGGGAGC TGAGCTCGCT GCACCAGGTG
GTGCGGCAGC AGGCGTACAT GATGGCGACG AACGACATGT TCTACATGGC GAGCGCGACG
TGCCTGCTGC TGGCGGGGCT GATGTGGCTG ACGCGGCCGA AGCGGGGCGC GGCGGCGGCG
CTCGGGCACT GA
|
|---|
| Protein sequence | MSAQAMSADQ AGVAPPAAAP LRGAKLALLT FALSLATFIE VLDSTVANVA VPAISGSLGV
SNSQGTWVIS SYSVAAAIAV PLTGWLARRV GELRLFVASV ILFTLTSLLC GLARDLEVLV
ACRALQGLFS GPMVPLSQTI LMRAFPPARR TLALALWGMT VLLAPIFGPV VGGWLIDNFS
WPWIFLINLP IGLFSFAVCT LMLRPQAQRG EASPIDAPGI VLLVIGVGSL QAMLDLGHDR
GWFDSPLITA LAIAAGVSLV SLLIWELGEA HPVVDLSLFR ERTFTFCVVI ISLGMMSFSV
VGVVFPLWLQ AVMGYTAYQA GLATASMGVL ALVFSILVGL YASRVDARVL VTFGFGVFAA
VMWWSTHFTL SMTFAQVVTP RLIQGMGLPC FFIPLTAATL SRVPDEKLAA ASSLSNFLRT
LSAAFGTALS VTWWDNRATY HYAVVSQSVT RASENTQRYV DALHAMGLHG ARELSSLHQV
VRQQAYMMAT NDMFYMASAT CLLLAGLMWL TRPKRGAAAA LGH
|
|---|
| |