Gene BTH_II0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0875 
Symbol 
ID3845515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1026584 
End bp1028185 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content69% 
IMG OID637838178 
ProductHep_Hag family protein 
Protein accessionYP_439072 
Protein GI83716561 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTTCAT CCATCGCACC GCTCGCGCTC GGATTTTCCG CGGATGCATT CGCCGCTGAC 
GAGACGATGG CTTCTCCATT CAATCGAGGC GCGCCGAACG ACGCTCACGG AAATCTGCTC
GATGAGATCA GAAGAGGCGT GCCGCTCAGA CATGTTCCGG CATCCGAACG AAACACGCGA
GGCGCGGGCG GCTCGACCCT CGCGGACGCG ATGAGGCGGG TAATCGACTC ACGGCGCACG
GCGTTCGATT CGCCTCCGGC GACTCCCGCA TCGCCCTCGC CGTCATGGTC GGACGACGAA
TCCCCTCCGC CGACGCCGAT CGCAACCCGA CCGGCATCGC GCCCGGAGTC TGCGGCGCGC
TCCCCGCGTC ATTCGTCTCC TCCGCATTCG CCGCCAGCTT CCGCCGAGTC GCCCTCGCCG
CGATCGCCCG ATGCGTCGCC TTCGCGAACG CCTTCGCCTA CGTTTTCGTT CCCGTCTCCG
TCGCGCACGT CGACGCCGAG GACGCAGCCG CCATCGCCGC TGCGCGAGCG CCCGGAACGC
TCGCCGGCCG CATCGCCGCG CGTCGCGTCG CCGCGGTCCG CGCATTCGCG CGGCTCGACG
CAGCCGCCTT CGAACCTCTC CACGCCGCGG TACGAACCGC CCACTCCGCT GCAGGAGGAC
CCGGAACGAA CGCCGGTCGC ATCGCCGCGC GTTGCGTCGC CGCGGTCCGC GCATTCGCGC
GGCTCGACGC AGCCGCCTTC GAACCTCTCC ACGCCGCGGT ACGAACCGCC CACTCCGCTG
CAGGAGGACC CGGAACGAAC GCCGGTCGCA TCGCCTCACG TCACGCCCGC GGAGCACGCG
CAGCGAAGGC CGTTTCTGCT GCAAAAGCCG CCGCAGGTAC CCTCGTGGCG AAAGAAGGCT
CCCTCCGCAA CCCTGCCCGA TTCGCACGCA CCCGCTCGGC CTGGGGGGGG GCAGTTCACC
ACGCCGGCTT CCGGGGCCGC GAAATACGTT GCGGTCAACT CCGGGGCGAG CGACGCGTTC
GCGGCAGGCG TCAACGCAGT GGCGATTGGA GCCGACGCGC GAGCGCAAGG TCAGGAATCG
CTCGCGACCG GCTGGCGTGC GCAAGCAGAC GGCCATCGCG CGGTCGCGAC CGGCGCACGC
GCAATCGCAT CCGGCCGCGA CGCCGTCGCG CTCGGCGCAG GATCGATAGC GGACCGCGAC
AACACCGTAT CTGTCGGTCA GCGCGGCAGC GAACGCCAGA TCGTGCATGT CGCCCCCGGC
GCCCAAGGCA CCGATGCGGT GAACGTCGAT CAGTTGAATC TCGCAATATC GAACTCGAAC
GCGTACACGA ACCAGCGCAT CGGCGACCTT CAGCAAAGCA TCACCGAAAC CGCGCGCGAC
GCGTATTCCG GCGTCGCCGC GGCGACCGCG CTCACGATGA TTCCCGATGT CGACCGCGAC
AAGATGTTGT CGATCGGCGT AGGCGGCGCG GTCTACAAGG GCCATCGCGC CGTCGCGCTC
GGCGGCACCG CGCGCATCGG CGAAAACCTC AAGGTGCGCG CGGGCGTCGC GATGAGCGCG
GGCGGCAATA CGGTCGGCGT AGGCATGAGC TGGCAATGGT GA
 
Protein sequence
MCSSIAPLAL GFSADAFAAD ETMASPFNRG APNDAHGNLL DEIRRGVPLR HVPASERNTR 
GAGGSTLADA MRRVIDSRRT AFDSPPATPA SPSPSWSDDE SPPPTPIATR PASRPESAAR
SPRHSSPPHS PPASAESPSP RSPDASPSRT PSPTFSFPSP SRTSTPRTQP PSPLRERPER
SPAASPRVAS PRSAHSRGST QPPSNLSTPR YEPPTPLQED PERTPVASPR VASPRSAHSR
GSTQPPSNLS TPRYEPPTPL QEDPERTPVA SPHVTPAEHA QRRPFLLQKP PQVPSWRKKA
PSATLPDSHA PARPGGGQFT TPASGAAKYV AVNSGASDAF AAGVNAVAIG ADARAQGQES
LATGWRAQAD GHRAVATGAR AIASGRDAVA LGAGSIADRD NTVSVGQRGS ERQIVHVAPG
AQGTDAVNVD QLNLAISNSN AYTNQRIGDL QQSITETARD AYSGVAAATA LTMIPDVDRD
KMLSIGVGGA VYKGHRAVAL GGTARIGENL KVRAGVAMSA GGNTVGVGMS WQW