Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0690 |
Symbol | gmd-2 |
ID | 3845178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 806188 |
End bp | 807231 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637837995 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_438889 |
Protein GI | 83716887 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00490394 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG CACGCAAGGC GATCATCACC GGGATAACGG GCCAGGACGG CGCTTATCTG ACGAAGCTTC TGCTCGACAA GGGCTACGAG GTCGTCGGCA CGTACCGCCG CACGAGCTCG GTGAACTTCT GGCGCATCGC CGAACTGGGC GTCGACAAGC ACCCGAACTT GACGCTCGTC GAGCATGACC TGACCGATCT CGGCTCGAGC CTGCGCCTCA TCGAACGCGC GCAGCCGAAC GAGGTTTACA ACCTCGCCGC GCAAAGCTTC GTCGGCGTGT CGTTCGACCA GCCGGCGACG ACGGCCGAAG TCACGGGCAT CGGCGCGCTG AACCTGCTCG AGGCGATCCG CGTCGTGAAC CCGAAGATCC GCTATTACCA GGCGTCGACC TCGGAGATGT TCGGCAAGGT GCAGGCGATT CCGCAAACCG AGAGCACGCC GTTCTATCCG CGCAGCCCGT ACGGCGTCGC GAAGCTGTTC GCGCACTGGA CGACGGTCAA CTATCGCGAG TCGTACGGCA TCTTCGGCTC GAGCGGAATC CTGTTCAATC ACGAATCGCC GCTGCGCGGC CGCGAGTTCG TCACGCGCAA GATCACCGAT ACCGTCGCGA AGATCAAGCT CGGCAAGGCG AGCCGGCTCG AGCTCGGCAA CATGGGCGCG AAGCGCGACT GGGGCTTCGC GCTCGAGTAC GTCGAGGGAA TGTGGCGCAT GCTGCAAGTG GACGAGCCCG ACACCTACGT GCTCGCGACG AACCGCACCG AGACGGTCCG CGATTTCGTG CGGATGGCGT TCGCGGCGGC CGGCTACCAG CTCGAATGGA GCGGCAAGGC CGAGGACGAA CGCGGCATCG ACACGGCGAC GGGCAACGTG CTCGTGTCGG TGAATCCGAA GTTCTACCGC CCGGCCGAAG TGGATCTGCT GATCGGCTGC GCGGACAAGG CGAGGGACAA GCTCGGCTGG GCTCCGAGGA CGACGCTCGA AACACTGTGC CGGATGATGG TCGAAGCCGA CATCACGCGC AACCGCCACC ATGAAACCTT CTGA
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Protein sequence | MTQARKAIIT GITGQDGAYL TKLLLDKGYE VVGTYRRTSS VNFWRIAELG VDKHPNLTLV EHDLTDLGSS LRLIERAQPN EVYNLAAQSF VGVSFDQPAT TAEVTGIGAL NLLEAIRVVN PKIRYYQAST SEMFGKVQAI PQTESTPFYP RSPYGVAKLF AHWTTVNYRE SYGIFGSSGI LFNHESPLRG REFVTRKITD TVAKIKLGKA SRLELGNMGA KRDWGFALEY VEGMWRMLQV DEPDTYVLAT NRTETVRDFV RMAFAAAGYQ LEWSGKAEDE RGIDTATGNV LVSVNPKFYR PAEVDLLIGC ADKARDKLGW APRTTLETLC RMMVEADITR NRHHETF
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