| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0536 |
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| Symbol | |
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| ID | 3846657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 635826 |
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| End bp | 637094 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637837841 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | YP_438736 |
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| Protein GI | 83717364 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.726292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACG CCGTCGTCCA TCGCGCGATC GACGCCGTCT GGCGGATCGA GGCCGCGAGA
ATCATCGCGC ATGTCGCGCG GCTCGTGCGC GACGTCGGCG TGGCCGAGGA ACTCGCGCAG
GACGCGCTCG TCGCGGCCCT CGAGCACTGG CCGAGCGACG GCGTACCGGA GAATCCGGGC
GCGTGGCTGA TGACGGCCGC GAAGCGCCGC GCGCTCGATC ATCTGCGGCA GAACGTGCTG
CATGCGCGCA AGCGCGAGCA GATCGGCCTC GATCTTGATG CGCTCGGCGC GCACGTCGCG
CCGGACGTCG CCGATGTGTT CGAGGCGGCG CGCGACGACG ACATCGGCGA CGATCTGCTG
AGGCTCGTGT TCACCGCGTG CCATCCGGTG CTGTCGACCG ACGCGCGCGT GGCACTGACG
CTGCGGCTGC TCGGCGGGCT GACGACGGGC GAGATCGCGC GCGCGTTTCT CACGCCCGAG
CCGACGATCG CGCAGCGGAT CGTGCGCGCG AAGCGCACGC TGTCGGCGGC GAAGGTGCCG
TTCGAGGTGC CGCGCGCGCC GGAGCGCGCG GCGCGGCTTG CTTCGGTGCT CGAAGTGATT
TATCTGATCT TCAACGAAGG CCATTCGGCG ACGGCGGGCG ACGACTGGAT GCGTCCCGCT
CTGACCGACG AAGCGCTGCG GCTCGGGCGC GTGCTCGCCG GGCTCGCGCC CGACGAGAGC
GAGGTGCACG GGCTCGTCGC GCTGATGGAG ATCCAGGCGT CGCGGATGCA CGCGCGCGTC
GACGCGCAAG GGCGTCCCGT GCTGCTGCTC GATCAGGACC GCAGCCGCTG GGACCCGCTG
CTGATCCGGC GCGGGCTCGC CGCGCTCGCG CGTTCGGAGG CGCTCGGCGG CGCGAGCGGG
CCGTATGCGC TGCAGGCCGC GCTCGCCGCG TGCCACGCAC GCGCGCGCAG CGCCGACGAC
ACGGACTGGG AGCAGATCGT CGCGCTCTAC GACGCGCTCG CGCAGGTCGC GCCTTCGCCC
GTCGTCGAGC TGAATCGCGC GGTCGCGGTC GGCATGGCGT TCGGGCCGGC CGCGGGGCTC
GAGATCGTCG ACGCGCTCGC GGCCGATCCC GCGCTCGCGC GTTATCACTG GCTGCCGAGC
GTGCGAGGCG ATCTGCTCGC GAAGCTCGGG CGGCGCGACG AGGCGCAGGC CGAGTTCAGG
CGCGCGGCCG ACATGACGCT CAATGCGCGC GAGCGCGAGA TGCTGCTTGC GCGCGCGATG
CAGCGGTGA
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| Protein sequence | MTDAVVHRAI DAVWRIEAAR IIAHVARLVR DVGVAEELAQ DALVAALEHW PSDGVPENPG
AWLMTAAKRR ALDHLRQNVL HARKREQIGL DLDALGAHVA PDVADVFEAA RDDDIGDDLL
RLVFTACHPV LSTDARVALT LRLLGGLTTG EIARAFLTPE PTIAQRIVRA KRTLSAAKVP
FEVPRAPERA ARLASVLEVI YLIFNEGHSA TAGDDWMRPA LTDEALRLGR VLAGLAPDES
EVHGLVALME IQASRMHARV DAQGRPVLLL DQDRSRWDPL LIRRGLAALA RSEALGGASG
PYALQAALAA CHARARSADD TDWEQIVALY DALAQVAPSP VVELNRAVAV GMAFGPAAGL
EIVDALAADP ALARYHWLPS VRGDLLAKLG RRDEAQAEFR RAADMTLNAR EREMLLARAM
QR
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