| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0447 |
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| Symbol | |
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| ID | 3846562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 533846 |
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| End bp | 535330 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637837752 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_438647 |
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| Protein GI | 83717425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0433676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACAT CGCGTCCGAT TAGCCGCGCA CCCTGGGGCC GGCGGCGTTT CGCCGCGATC
GCGCTCGGCT GCGCGGCGCT CGTCACAGGG TGCGCGGTCG GCCCCGACTT CGTTCGTCCC
GAGCCGCCGC GCGTCGACGC CTACGTGCCC GGCGGCGCCG TTCGCGCGAG CTTCGCCGCG
AGCGGCGCGA CGCAGACGCT CGCGCCCGAT GCGCCGTTTC CCGATGCGTG GTGGCGCCTG
TTCGGCTCGC ACGACATCGA CGCGGCCGTC GACGACGCGT TCGCCGGCAG TCCGACGCTC
GCCGGCGCGC AGGCGACGCT CAGACGCAGC GAGCACGAGC TGATGGCGGG CGCGGGCGTG
TTCTATCCGC AGGCCGACGC GCAGGCGGGC GCGTCGCGGC AGCGCTACGT GCCGCTGCGC
ACGGGCGCGA ATCTGCCCGC GTCGATCTTC AATCTGTTCA CGTTGTCGAC GACGATCAGC
TATGCGATCG ACATCTGGGG CGGCGAGCGG CGCAACGTCG AGGGGCTCGC CGCGCAGGCC
GACGCGCAGC ATCATGCGCT CGCGGCCGCG CGGCTCACGC TCGCGGCGAA CGTCGTCAAC
ACGATGATCG CGCGCGCCGC GTATGCGGAC GAGATCGCGG TCACGCGCGA GCTGATCGCG
CTGACGGACG AGCAGGTCCG CTTGACGCGC GCGCAGGTGA GCGCCGGCAC GAGCGCGTAC
ACGGCCGTGC TCGCGCTCGA CGCGGCGCGC GCGGCGCTCG ATGCGTCGCT GCCCGCGCTC
GAGCAGAAGA TCGGCCAGGC CGACGACCTG CTCGCAACGC TCGCGGGCCG CTATCCGGCC
GAGCGCGTGC CGCCCGGGAT GTCGCTTGCG GACATCGCGT TGCCCGCGCG GCTGCCGCAG
ACGGTGCCGT CCGAGCTCGT GCGCCGCCGG CCCGACATCC TGCAGGCCGA GGCGGCGCTG
CACGCGGCGA GCGCGAACAT CGGCGTCGCC ACGGCGGCGC TGTTCCCAAG CATCACGCTG
ACGGCGTCGG GCAGCTTCAA CACCGTGCAG CTGCCGTCGT TGTTCGCGGC GGGAGGCAAG
GCGTGGAGCG TCGGTGCGGG AATCACCGCG CCGCTCTTTC GCGGCGGCGC GCTGTGGTAT
CAACGCAAGG CCGCGATCGA CGCGTTCGAC GAATCGAGCG CCGCCTATCG GCAAGTGGTG
CTGAGCGCGT TCGCGCAGGT TGCCGATACG TTGCGCGCGC TCGACCACGA CGCGGCGGCG
CTCGAGGCGC AGTCGCGCGC GATGGCCGCG GCGCGCGACG CGCTGCGGCT CGTGACGATC
GAATACGAGA CGGGCGCGGC CGGCTACCTG CAGGTGCTGG CCGCCGATCA GCAATACCGG
CAGGCGCGGC TTGCGTGGGT GCAGGCGAGC GCGCAGCGGC TGCAGGACAC GGTCGCGCTG
TATGCGGCGC TCGGCGGCGG GTGGGACGAG GCGCGCAAAC GGTGA
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| Protein sequence | MYTSRPISRA PWGRRRFAAI ALGCAALVTG CAVGPDFVRP EPPRVDAYVP GGAVRASFAA
SGATQTLAPD APFPDAWWRL FGSHDIDAAV DDAFAGSPTL AGAQATLRRS EHELMAGAGV
FYPQADAQAG ASRQRYVPLR TGANLPASIF NLFTLSTTIS YAIDIWGGER RNVEGLAAQA
DAQHHALAAA RLTLAANVVN TMIARAAYAD EIAVTRELIA LTDEQVRLTR AQVSAGTSAY
TAVLALDAAR AALDASLPAL EQKIGQADDL LATLAGRYPA ERVPPGMSLA DIALPARLPQ
TVPSELVRRR PDILQAEAAL HAASANIGVA TAALFPSITL TASGSFNTVQ LPSLFAAGGK
AWSVGAGITA PLFRGGALWY QRKAAIDAFD ESSAAYRQVV LSAFAQVADT LRALDHDAAA
LEAQSRAMAA ARDALRLVTI EYETGAAGYL QVLAADQQYR QARLAWVQAS AQRLQDTVAL
YAALGGGWDE ARKR
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