| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0291 |
|---|
| Symbol | |
|---|
| ID | 3845105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 357484 |
|---|
| End bp | 358344 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637837596 |
|---|
| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
|---|
| Protein accession | YP_438492 |
|---|
| Protein GI | 83716072 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATATC GCTCACAACT TCGCGCAGGC AGCTTCGACG GCAAGATCGC GCTCGTCACG
GGCGGCGGCA GCGGCATCGG CCGCTGTTGC GCGCACGAGC TTGCGTCGCT CGGCGCGCAC
GTCGTGCTGC TCGGGCGCAA CGCGGACAAG CTCGCGAACG TGTCGGCGGA AATCGGCGAG
GACGGCGCCC GCGCGGACAC GATCGCGTGC GACATCCGCG ACGAGGACGC CGTGCGGCAG
GCAGTCGCGC AAATCGTCGA GCGGCACGGC CGCGTCGATC TGCTCGTGAA CAACGCGGGC
GGCCAGTTTC CCGCGCCGCT CGAGCAGATC AGCGCGAAAG GCTGGCAGGC GGTGCTGAAC
ACGAACCTGC TCGGCGGCTT TCTCGTCGCA CGCGAGTGCT ACGTGCAATC GATGAAGCCG
CGCAAGACGG GCGCGATCGT CAACATCATC GCCGACATGT GGCACGGCAT GACGGGCATG
GGCCACAGCG GCGCCGCGCG CGCCGGCATG CTGAACCTCA CCGAGACGGC CGCCGCCGAA
TGGGCGCCCG TGCGCGTGAA CGCGGTCGCG CCCGGCTGGA TCGCATCGAG CGGCATGGAC
ACCTACCCCG ACGCGATCAA GCCGATGCTG CGCGGGCTGC CGAAGATGGT GCCGCTCGGG
CGCATCGGCA ACGAAGCCGA AGTGTCGGCG GCGATCGCGT TCCTGCTGTC GGACGCCGCG
TCGTTCATCA GCGGCGCGTG CCTGCGCGTC GACGGCGGCG CACCGAACGC GCGCCGCCAC
TTCGCGATGC AGCCGGTCGA CGCGAACGCG CCGTTCGACG GCTTCCATCG CGCGATCGCG
CCCGAACTCT TCAGGCGCTG A
|
|---|
| Protein sequence | MGYRSQLRAG SFDGKIALVT GGGSGIGRCC AHELASLGAH VVLLGRNADK LANVSAEIGE
DGARADTIAC DIRDEDAVRQ AVAQIVERHG RVDLLVNNAG GQFPAPLEQI SAKGWQAVLN
TNLLGGFLVA RECYVQSMKP RKTGAIVNII ADMWHGMTGM GHSGAARAGM LNLTETAAAE
WAPVRVNAVA PGWIASSGMD TYPDAIKPML RGLPKMVPLG RIGNEAEVSA AIAFLLSDAA
SFISGACLRV DGGAPNARRH FAMQPVDANA PFDGFHRAIA PELFRR
|
|---|
| |