| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0254 |
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| Symbol | |
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| ID | 3845520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 308851 |
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| End bp | 312480 |
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| Gene Length | 3630 bp |
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| Protein Length | 1209 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637837560 |
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| Product | putative lipoprotein |
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| Protein accession | YP_438456 |
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| Protein GI | 83716527 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.452905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACG CTGTCGCACG CATCGTTCGC CCGCTGCCGT CGCGGGAAAT CTGGACGTTC
GCCGGCCTCG TCGGGCTGGC GTGCTTCGTC TGGCTCGCCG GGCCGCTGTT CGCGTTCGCC
GAGTTCCACC CGTTCGAGAG CGGCTGGGCG CGCGCGCTGA CGATCGCCGC GCTGTTCGTC
GCGTGGGGCG CGCGGATCGC GTGGCGCAAC TGGCGCGCGG GCCAGCTGAA CGCGCAGTTG
CTGAACCAGT TGCGCGAAGC GTCGCCGCGG CCGGCCGCGC CGGGCGACCC CGCGCGCGCG
CAGCTCGACG AGCTGCGCAG CCGCTTCGAC GAAGCGTCGA CGCTCCTGAA GAAAGTTCGC
TTCGGCGCCG CCGACGGCGC GCGCAAGGGC CTGCCTCAAT GGCTCGAACG GATGTCGCGC
CAGTATCTGT ACCAACTGCC GTGGTACGTG TTCATCGGCG CGCCCGGCTC GGGCAAGACG
ACGGCGCTCG TCAACTCGGG GCTCAGCTTT CCGCTCGCCG AGCAGTTCGG GCGCGCGGCG
ATTCGCGGCG TCGGCGGCAC GCGGCACTGC GACTGGTGGT TCACGAACGA CGCGGTGCTG
ATCGACACCG CGGGCCGCTA TACGACGCAT GAGAGCAATC GCGCGCTCGA CGAGGCCGAA
TGGAACGGCT TCGTCGATCT GCTGAAGAAG TACCGCGCGC GCCAGCCGCT GAACGGCGCG
ATGCTGACGA TCAGCGTCGC CGATTTGCTC GGCGCGTCCG AGGCGGAGCG CACGCAGCAC
GCGATGGTGC TGCGCAAGCG CCTGCTCGAG CTGCGCTCGC AGCTCGGCAT TCGCTTTCCG
GTGTACCTGC TCGTGACGAA GGCGGACCTG CTCGCCGGCT TCGCCGAATA CTTCGGCGGC
TTCGGCCGCG CGGAGTGCGC GCAGGTGTGG GGCTTCACGT TCCCGCTCGC CGAGAGCGAG
GCGCCCGGCT TCGACTTGCG CGCGGCGTTC GATCGCGAAT ATCGGCTGCT GCACAAACGG
CTGAACGACG GGCTGCCCGA GCTGCTCGCG TCGCAGACCG ATGCGCACCA GCGCGAGATG
AGCTACCTGC TGCCGCAGCA GATCGCCGAT CTGCAGGACA TGCTCGGCCA GTTCGTCGCC
GAGGTGTTCT CGGTGTCGAG CTTCGAGCCG ATGCCGATGC TGCGCGGCGT GTACCTGACG
AGCGGCACGC AGGAAGGCAC CGCGTTCGAC CGCGTGATGA GCGGGATCAA GCGCTTCCTG
AAGATCGAGG GCGTGCCGCC CGCCGCGCAG ACGGGCTCGA CCGGCCGCAG CTTCTTCCTG
AAATCGCTGC TGCAGGACCA CATCTTCCGC GAGGCGGCGC TCGCCGGCAG CAATCTGCGC
TGGCATCGGC GGCAGCGCGT GCTGCAGATC GTCGGCTACG CGGCGATCGT GCTGCTGTGC
GTCGCGGTGC TGTTCGCGTG GCTGCGCAGC TACTCGCGCA ATCGCGGCTA CCTCGACCAG
GTCGCCGCGC GCGTGCCGGC CGTCGACGCG CAGATCAGCC GCGCGAAGTT CACGGGCGCG
GCCGACGTCG TCCAGCTGCT GCCCGTGCTC GACGAGCTGA GCGGGCTGCC GAGCGCGGGC
GGCGTCGATT TGCGGCATCC GCCGCTTGCG TATCGCTGGG GCCTCTTTCA GGGCGAGAAG
ATCGAGGAGG CGAGCGACGC CGTGTACCGC CGCGCGCTCG ACGACGTGCT GCTGCCGATC
GCCGCGAGCC GCATGGAGCA GGCGCTGCGC GAAGCGCGGC CCGACGAGGT CGAGTACGCG
TACGCGGCGC TCAAGGCGTA CCTGATGCTC TACGACGGCG CGCATTACGA TCCCGCGTTC
GTGCAGGCTG TCGTCGATCT CGAGATGGAG CGCTCGCTGC CCGCCGATTT CTCGTCCGCG
CAGCGCAGCG CGCTGCGCTC GCATCTCGGC GCGCTGTTCG GCAATCGCGT CGCGGTGTCG
CCGTTCCCGA TGAACGAACG GCTCGTGGCC GACGTGCGCG AGCGGCTGCG GCAGGTGCCG
TTCTCGCAGC GGCTGTACCG GCAGCTCGCG CGCACGCTGC GCCCGAGCAC CGCGACGTAC
GACTTCAGCG TCGCGCGCGC GGTCGGGCCG GACGCGTCGC TCGTGTTCCG CCGGCAGAGC
GGCAAGAGCC TCGCCGATGG CGTGCCGGGC CTCTACACGC GCGACGGCTA CCGCAACGTG
TTCGCGCCGC GGCTGCCCGG CGCGATCGAT GCGTACGGGC GCGAGGAGGT GTGGGTGCTG
AATCTCGGCG CGTCCGAGAC CCCGAATCCG GCCGATGCGG CCGCCTGGGC GCGCGACATC
CGGCAGCTCT ATCTGAACGA CTACATCAAG AACTGGGACG ACTATCTGGC CGACATCCGG
CTGCAGCACA CGTCGACGCT CGCGCAGAGC ATCCAGGTCG CGCGCACGCT GTCGTCGGCC
GATTCGCCGC TCACGCGGCT GATGGTCGCG CTCGCGCGCG TCACGCCGCT CGGCGATGCG
CCCGGCGGCG CGCGCAACCT CGCGTCGCGC GCGCAGGACA AGGTCGACGA GGCGCGCAAT
TCGCTTGCGC AGATCTTCGC CGGCCAGCCG GGCGCGGACG CGGGCGCGGC GGCCGCCTCG
CCCGCGAGCC CCGAGCAGAT CGTCGACAGC CACTTCGCGG GGCTGCGCGC GTTCGCGCCG
GGCGGCGGCG ATCAGGCGGC GTCGTTCGAC GCGGTGCTCA AGGCGATCGA CGCGCTGTAC
ACGTATTTGA CCGCGACCGA CGACGCGCTG CGCGGCGGCG CGACGCCGCC GCCGTCGGAC
GCGCCCGCGC GGCTGCGCGC GCAGGCGGGC CGGCTGCCGA CGCCGTTTCG CGAGGTGCTC
GACGATCTGT CGAACGTCGC GAACGGCAGC GTCGCGAGCG TCGAGCAGCG CAACGTCGCG
CAGCGCGCGG GCGCGAACGT CGGCGATTTC TGCCGGCAGG CGATCGCCGG GCGCTATCCG
TTCGCGCGCG GCGCGTCGCG CGACGTCGCG CCGTCCGACT TCGCGCAGAT GTTCGCGGCG
GGCGGCCTGA TGGACGACTT CTTCCAGAAG AACCTGCAGA CGCTCGTCGA CACGACCACG
CACCCGTGGC GCTTCAACAA CCGCAACGCC GAAGCCGACC CGGCGGCGGC CGCGATGCTC
GGCTCGTTCG AGAAGGCCGC GGTGATCCGC GACGTCTATT TCGGAGGCGG CGCGCGGACC
GCGCAGATCA AGGTCGAGAT CGTACCGCTC GAAATGGACC CGTCGATCTC GGAGATGGTG
CTCGACGTCG ACGGCCAGAT CGTCCGCTAC GCGCACGGCC CGCAGGTGCC GACGGCGGTG
CAGTGGCCCG GCCCGCGCGG CAGCGATCAG GTGCGGCTGC AGGTGACCGA GCAGTCGGGC
GCGACGGGCG GCTTCACGAC CGAGGGGCCG TGGGCGCTGC ACCGGCTGTT CGATCGCGCG
GGCGTGTCGG GCGGGCGCGG GCCCGAGCAG ATGGTCGCGA GATTCGCGGT GGACGGCAAG
CCGATCGTGC TGCAGGTGAC GGCGAGCAGC GTGCGCAACC CGTTCCGGCT GCCGCAGATG
GAGTCCTTTA CATGCCCTCC GAAGCAATGA
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| Protein sequence | MSHAVARIVR PLPSREIWTF AGLVGLACFV WLAGPLFAFA EFHPFESGWA RALTIAALFV
AWGARIAWRN WRAGQLNAQL LNQLREASPR PAAPGDPARA QLDELRSRFD EASTLLKKVR
FGAADGARKG LPQWLERMSR QYLYQLPWYV FIGAPGSGKT TALVNSGLSF PLAEQFGRAA
IRGVGGTRHC DWWFTNDAVL IDTAGRYTTH ESNRALDEAE WNGFVDLLKK YRARQPLNGA
MLTISVADLL GASEAERTQH AMVLRKRLLE LRSQLGIRFP VYLLVTKADL LAGFAEYFGG
FGRAECAQVW GFTFPLAESE APGFDLRAAF DREYRLLHKR LNDGLPELLA SQTDAHQREM
SYLLPQQIAD LQDMLGQFVA EVFSVSSFEP MPMLRGVYLT SGTQEGTAFD RVMSGIKRFL
KIEGVPPAAQ TGSTGRSFFL KSLLQDHIFR EAALAGSNLR WHRRQRVLQI VGYAAIVLLC
VAVLFAWLRS YSRNRGYLDQ VAARVPAVDA QISRAKFTGA ADVVQLLPVL DELSGLPSAG
GVDLRHPPLA YRWGLFQGEK IEEASDAVYR RALDDVLLPI AASRMEQALR EARPDEVEYA
YAALKAYLML YDGAHYDPAF VQAVVDLEME RSLPADFSSA QRSALRSHLG ALFGNRVAVS
PFPMNERLVA DVRERLRQVP FSQRLYRQLA RTLRPSTATY DFSVARAVGP DASLVFRRQS
GKSLADGVPG LYTRDGYRNV FAPRLPGAID AYGREEVWVL NLGASETPNP ADAAAWARDI
RQLYLNDYIK NWDDYLADIR LQHTSTLAQS IQVARTLSSA DSPLTRLMVA LARVTPLGDA
PGGARNLASR AQDKVDEARN SLAQIFAGQP GADAGAAAAS PASPEQIVDS HFAGLRAFAP
GGGDQAASFD AVLKAIDALY TYLTATDDAL RGGATPPPSD APARLRAQAG RLPTPFREVL
DDLSNVANGS VASVEQRNVA QRAGANVGDF CRQAIAGRYP FARGASRDVA PSDFAQMFAA
GGLMDDFFQK NLQTLVDTTT HPWRFNNRNA EADPAAAAML GSFEKAAVIR DVYFGGGART
AQIKVEIVPL EMDPSISEMV LDVDGQIVRY AHGPQVPTAV QWPGPRGSDQ VRLQVTEQSG
ATGGFTTEGP WALHRLFDRA GVSGGRGPEQ MVARFAVDGK PIVLQVTASS VRNPFRLPQM
ESFTCPPKQ
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