| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0124 |
|---|
| Symbol | |
|---|
| ID | 3846709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 143315 |
|---|
| End bp | 143857 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637837430 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_438326 |
|---|
| Protein GI | 83717629 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCC AATTTTTCTT TCGCCGCGAA GCGGCCAGGC GAACCGCGGT CAAGCGGATC
GTGGCGGCAA TGGTATGCGC GTCGCTCGCG GCGTGCGCAA GCTTGCCGGC ACGCAAGGAA
ACAGCCGATC TGATCGTGAA GATCAAGGTG AGCGAAGGCG CGAACCCGGA TGAGCATGAA
CGCCCGGCGC CCGTGATGGT GCGGCTGTAC GAGCTGAAAT CGGCCGGCGC GTTCGAGAAC
GCCGATTTTT TCACGCTGCA GAGCGACAGC CGGAAGGTGT TGGGTGACGA CGCGATCGCG
ACGGATGAAT TCGTGATGCG TCCGGGCGAC ACCCGAGATA TTCACCGGCG CGCCGATTCC
GCGGCCACGT CGATCGGCGT GCTGGTGGGC TATCGGGCGC TCGGCAAATC GGTGTGGCGG
GCGGTGCATA AGCTGCCGCC GGTTCCCGAA GATGCATGGT ACCGGGCATT CACGCCAAGG
ACGAAGATCA AGTTGAACGT CGATGTCGGG CAGCAAACCG TGTCGATTAC AGAATTGGAA
TGA
|
|---|
| Protein sequence | MVSQFFFRRE AARRTAVKRI VAAMVCASLA ACASLPARKE TADLIVKIKV SEGANPDEHE
RPAPVMVRLY ELKSAGAFEN ADFFTLQSDS RKVLGDDAIA TDEFVMRPGD TRDIHRRADS
AATSIGVLVG YRALGKSVWR AVHKLPPVPE DAWYRAFTPR TKIKLNVDVG QQTVSITELE
|
|---|
| |