Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0085 |
Symbol | potC |
ID | 3845264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 93392 |
End bp | 94246 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637837391 |
Product | ABC transporter, permease protein |
Protein accession | YP_438287 |
Protein GI | 83716817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCGC GTGAACTGCG CCACTTTCCG CTTACGGCAG AAGTCGCGAT TGCCGTCCTG TTGTTTCTCT ATCTGCCGTT GGCGGTTGTC GCGTGGATGA GTTTCAATCG AGGCCCATCG GCGCTTGTTT GGGAGGGTTG GAGCGTCCAG GGATACGTCG AGGCATGGTT TGATCCGACG CTTATTCGTG CGACACGAAA CTCCCTGATC CTAGCGTTGT CATCGATGGT TTTTTCGACC GCCCTTGCAA CGAGTGCGGC CGTCGCTGCG TGGTCGCGGC AGGAAACTCG CCGCTCCGAT CTGCGCGGAG TTGTAATTGC TTTGCCGCTC GTGATACCGG AGGTTGTTCT CGCGATCGCT ACGGTGATGA TGTTTTCGAT ATTCGCGTTC GAAATCGGGT TCGTTGCAGT CCTGTTTGCG CACGTAGTGT TTTGTGTCCC ACTCGCGTAT CTCCCGATCA ACGCACGTCT TAAGACAATC GATCGGACGT TACTTGAGGC GGCGGCCGAC TTGTCGGCTC CGCCATGGGC GGCATTTCGT CAAATCACGG TTCCTTTGGC ATTGCCCGGT ATCGTCGCCG GTGCGCTGCT TGCGTTCGTC GCGTCTATGA ACGACTACGT CACCAGCTAC TTCTTGGCTG GTGCCGGCAT GACCACCTTG CCTATGTACA TCTTCAGCGC ATTGAAGATC GGAATTACGC CAAAGGTAAA TGCTATCTCG ACAGCCGTCA TTGGACTTTC GTCGATTCAA CTACTGACGG TCTGGGTTCT CGGTAGGAAG GGTGCAGGAC AGACTGCCAC GCCGGGGAGA TCCGAGCTGT GTCACGCGAA CATTCAAACG ATAGGAACCG TATGA
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Protein sequence | MTSRELRHFP LTAEVAIAVL LFLYLPLAVV AWMSFNRGPS ALVWEGWSVQ GYVEAWFDPT LIRATRNSLI LALSSMVFST ALATSAAVAA WSRQETRRSD LRGVVIALPL VIPEVVLAIA TVMMFSIFAF EIGFVAVLFA HVVFCVPLAY LPINARLKTI DRTLLEAAAD LSAPPWAAFR QITVPLALPG IVAGALLAFV ASMNDYVTSY FLAGAGMTTL PMYIFSALKI GITPKVNAIS TAVIGLSSIQ LLTVWVLGRK GAGQTATPGR SELCHANIQT IGTV
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