Gene BTH_II0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0085 
SymbolpotC 
ID3845264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp93392 
End bp94246 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID637837391 
ProductABC transporter, permease protein 
Protein accessionYP_438287 
Protein GI83716817 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGC GTGAACTGCG CCACTTTCCG CTTACGGCAG AAGTCGCGAT TGCCGTCCTG 
TTGTTTCTCT ATCTGCCGTT GGCGGTTGTC GCGTGGATGA GTTTCAATCG AGGCCCATCG
GCGCTTGTTT GGGAGGGTTG GAGCGTCCAG GGATACGTCG AGGCATGGTT TGATCCGACG
CTTATTCGTG CGACACGAAA CTCCCTGATC CTAGCGTTGT CATCGATGGT TTTTTCGACC
GCCCTTGCAA CGAGTGCGGC CGTCGCTGCG TGGTCGCGGC AGGAAACTCG CCGCTCCGAT
CTGCGCGGAG TTGTAATTGC TTTGCCGCTC GTGATACCGG AGGTTGTTCT CGCGATCGCT
ACGGTGATGA TGTTTTCGAT ATTCGCGTTC GAAATCGGGT TCGTTGCAGT CCTGTTTGCG
CACGTAGTGT TTTGTGTCCC ACTCGCGTAT CTCCCGATCA ACGCACGTCT TAAGACAATC
GATCGGACGT TACTTGAGGC GGCGGCCGAC TTGTCGGCTC CGCCATGGGC GGCATTTCGT
CAAATCACGG TTCCTTTGGC ATTGCCCGGT ATCGTCGCCG GTGCGCTGCT TGCGTTCGTC
GCGTCTATGA ACGACTACGT CACCAGCTAC TTCTTGGCTG GTGCCGGCAT GACCACCTTG
CCTATGTACA TCTTCAGCGC ATTGAAGATC GGAATTACGC CAAAGGTAAA TGCTATCTCG
ACAGCCGTCA TTGGACTTTC GTCGATTCAA CTACTGACGG TCTGGGTTCT CGGTAGGAAG
GGTGCAGGAC AGACTGCCAC GCCGGGGAGA TCCGAGCTGT GTCACGCGAA CATTCAAACG
ATAGGAACCG TATGA
 
Protein sequence
MTSRELRHFP LTAEVAIAVL LFLYLPLAVV AWMSFNRGPS ALVWEGWSVQ GYVEAWFDPT 
LIRATRNSLI LALSSMVFST ALATSAAVAA WSRQETRRSD LRGVVIALPL VIPEVVLAIA
TVMMFSIFAF EIGFVAVLFA HVVFCVPLAY LPINARLKTI DRTLLEAAAD LSAPPWAAFR
QITVPLALPG IVAGALLAFV ASMNDYVTSY FLAGAGMTTL PMYIFSALKI GITPKVNAIS
TAVIGLSSIQ LLTVWVLGRK GAGQTATPGR SELCHANIQT IGTV