| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3253 |
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| Symbol | gcvP |
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| ID | 3848625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 3710198 |
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| End bp | 3713125 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637842919 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_443747 |
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| Protein GI | 83720548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCG AACACCCGGA CCGCCTGATG AAACGCACGC CCCTCTCGCT CGCCGCGCTC
GAAACGCACG ACGCGTTCGC CGAACGCCAT ATCGGCCCCG ATGCCGCCAG CCAGCAGGCC
ATGCTCGACA CGCTCGGCTT CGCGACGCGC GCCGCACTGA TCGACGCCGT GATCCCCGCG
TCGATCCGCC GCGCCGAAAC GCTGCCGCTC GGCCCGTTCG CGCAACCGTT GAGCGAGGCG
GAAGCGCTCG CCGCGCTGCG CGAACTCGCG GACAAGAACC AGGTGTTCCG CTCGTATATC
GGCCAGGGCT ACTACGACAC CCACACCCCG GCGGTGATCC TGCGCAACGT GCTCGAAAAC
CCGGCGTGGT ACACCGCGTA CACGCCGTAC CAGCCCGAAA TCTCGCAAGG CCGCCTCGAG
GCGCTGCTGA ACTTCCAGCA GATGGTCGCC GACCTGACGG GCCTCGAGAT CTCGAACGCG
TCGCTGCTCG ACGAAGCCAC GGCCGCAGCC GAAGCGATGA CGCTGCTGCA ACGCGTCGGC
AAGCCGCAGT CGAACGTGTT CTATGTCGCC GACGACGTGC TGCCGCAAAC GCTCGAAGTA
ATCAAGACGC GCGCGAAACC GATCGGCATC GAAGTGAAGT CGGGCCCGGC CGCCGACGCC
GCGGCCGCGA ACGCGTTCGG CGTGCTGCTG CAATATCCGG GCGTGAACGG CGACGTGCGC
GACTACCGCG CACTCGCCGA CGCAATCCAC GCGGCGGGCG GCCATGTCGT CGTCGCGGCC
GACATCCTCG CGCTCACCGT GCTCACGCCG CCCGGCGAAT GGGGCGCGGA CGTCGCGGTC
GGCAACACGC AGCGCTTCGG CGTGCCGATG GGCTTCGGCG GCCCGCACGC CGCCTACATG
GCGGTGCGCG ACGAATTCAA GCGGCAGATG CCGGGCCGCC TCGTGGGCGT GACCGTCGAC
GCGCAGGGCA AGCCCGCGCT GCGCCTCGCG CTGCAAACGC GCGAGCAGCA CATCCGCCGC
GAAAAGGCGA CGTCGAACGT CTGCACCGCG CAGGCGCTCC TCGCGATCAT GGCAAGCATG
TACGCGGTCT ACCACGGCCC GCGCGGCCTG AAGACGATCG CGCTGCGCGT GAACCGCATC
GCGGCGCTCG TCGCCGCCGG CGTGAAGCAA CTCGGCTTCG CGACCGTCAA CGACACGTTC
TTCGACACGC TGACGATCGA CACCGGCGCG CGCACCGCAC AGATTCATGC GCTCGCGAAT
GCGAAGCGCA TCAACCTGCG CCGTGTGAGC GACACGCGGG TCGGCATCTC TGTCGACGAG
ACGACGACCC GCGGCGATCT CGCCGAGCTG CTCGGAGTTT TCGCGCAAGC CGCGGGCGGC
ACCGCGCCCG ACGTCGATGC GCTCGACGCA GGCCTCGCCG ACACGGCGGC GCTGCCGGCC
GGCCTCCAGC GCACGAGCGC GTACCTCACG CACCACGTGT TCAACCGCCA CCATTCGGAA
ACGGAAATGC TGCGCTACCT GCGCAGCCTA TCTGACAAGG ATCTCGCGCT CGACCGCTCG
ATGATTCCGC TCGGCTCGTG CACGATGAAG CTGAACGCGA CCTCCGAGAT GCTGCCCGTC
ACGTGGCCCG AATTCGGCCG CATCCACCCG TTCGCGCCCG CCGAGCAGAC CGTCGGCTAC
CGCGAGATGA TCGACCAGCT CGAGCAGATG CTCGTCGCGG CAACGGGCTA CGCGGCCGTG
TCGCTGCAGC CGAACGCCGG CTCGCAGGGC GAGTACGCGG GCCTGCTCAT CATCCACGCG
TATCACGAGT CGCGCGGCGA GAGCCACCGC AACGTCTGTC TGATCCCGGC GTCCGCTCAC
GGCACGAACC CGGCGTCCGC GCACATGGCC GGCATGAAGG TCGTGGTCGT CGCGTGCGAC
GCGCAGGGCA ACGTCGACAT CGACGATCTG AAGGCGAAGG CCGAGCAACA CGCGAACGAC
CTCGCGGCGA TCATGATCAC GTACCCGTCG ACGCACGGCG TGTTCGAGCA GAACGTCCGC
GAGATCTGCG AGATCGTGCA CGCGCACGGC GGCCAGGTGT ACGTCGACGG CGCCAACATG
AACGCGATGG TCGGCCTGAC CGCGCCGGGC CAGTTCGGCG GCGACGTGTC GCACCTGAAC
CTGCACAAGA CCTTCTGCAT CCCGCACGGC GGCGGCGGCC CGGGCGTCGG CCCGGTCGCG
GTCGGCGCGC ACCTCGCGAA GTTCCTGCCG AACCAGCGGT CGACCGGCTA CGCGCGCGCG
GAAGACGGCA TCGGCGCGGT GTCGGCGGCG CCTTACGGCT CGGCGTCGAT CCTGCCGATC
TCGTGGATGT ACATCGCGAT GATGGGCGCG AAGAACCTGA CCGCCGCGAC GGAAACCGCG
ATCCTCAACG CGAACTACAT CGCGAAGCGC CTCGCGCCGC ACTATCCGGT GCTGTATTCG
GGCCCGGGCG GGCTCGTCGC GCACGAGTGC ATTCTCGATC TGCGCCCGAT CAAGGATTCG
AGCGGCATCA CCGTCGACGA CGTCGCCAAG CGCTTGATGG ACTATGGCTT CCACGCGCCG
ACGATGAGCT TCCCGGTGCC GGGCACGCTG ATGGTCGAGC CGACCGAGTC GGAATCGCAG
GAGGAACTGG ACCGCTTCGT CGCCGCGATG ATCGCGATCC GCGACGAGAT CCGCGCGGTC
GAGGAAGGCC GCGCCGACCG CGAGGACAAC CCGCTGCGTC ACGCGCCGCA CACGGCAGCC
GTCGTCACCG CGAACGAATG GCCGCACGCG TACTCGCGCG AGCAGGCCGC GTACCCGGTC
GCATCGCTCG TCGCGAACAA GTACTGGCCG CCCGTCGGCC GCGCGGACAA CGCATATGGC
GACCGCAATC TGTTCTGCTC CTGCGTGCCG GTATCGGATT ACGCGTGA
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| Protein sequence | MKLEHPDRLM KRTPLSLAAL ETHDAFAERH IGPDAASQQA MLDTLGFATR AALIDAVIPA
SIRRAETLPL GPFAQPLSEA EALAALRELA DKNQVFRSYI GQGYYDTHTP AVILRNVLEN
PAWYTAYTPY QPEISQGRLE ALLNFQQMVA DLTGLEISNA SLLDEATAAA EAMTLLQRVG
KPQSNVFYVA DDVLPQTLEV IKTRAKPIGI EVKSGPAADA AAANAFGVLL QYPGVNGDVR
DYRALADAIH AAGGHVVVAA DILALTVLTP PGEWGADVAV GNTQRFGVPM GFGGPHAAYM
AVRDEFKRQM PGRLVGVTVD AQGKPALRLA LQTREQHIRR EKATSNVCTA QALLAIMASM
YAVYHGPRGL KTIALRVNRI AALVAAGVKQ LGFATVNDTF FDTLTIDTGA RTAQIHALAN
AKRINLRRVS DTRVGISVDE TTTRGDLAEL LGVFAQAAGG TAPDVDALDA GLADTAALPA
GLQRTSAYLT HHVFNRHHSE TEMLRYLRSL SDKDLALDRS MIPLGSCTMK LNATSEMLPV
TWPEFGRIHP FAPAEQTVGY REMIDQLEQM LVAATGYAAV SLQPNAGSQG EYAGLLIIHA
YHESRGESHR NVCLIPASAH GTNPASAHMA GMKVVVVACD AQGNVDIDDL KAKAEQHAND
LAAIMITYPS THGVFEQNVR EICEIVHAHG GQVYVDGANM NAMVGLTAPG QFGGDVSHLN
LHKTFCIPHG GGGPGVGPVA VGAHLAKFLP NQRSTGYARA EDGIGAVSAA PYGSASILPI
SWMYIAMMGA KNLTAATETA ILNANYIAKR LAPHYPVLYS GPGGLVAHEC ILDLRPIKDS
SGITVDDVAK RLMDYGFHAP TMSFPVPGTL MVEPTESESQ EELDRFVAAM IAIRDEIRAV
EEGRADREDN PLRHAPHTAA VVTANEWPHA YSREQAAYPV ASLVANKYWP PVGRADNAYG
DRNLFCSCVP VSDYA
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