| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2612 |
|---|
| Symbol | |
|---|
| ID | 3848531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2973844 |
|---|
| End bp | 2974623 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637842281 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_443127 |
|---|
| Protein GI | 83721581 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGTT CGATCAATCT GGAGGGCAAG GTCGCGTTCA TCACGGGCGC GTCGAGCGGT
CTCGGGCAGC GCTTCGCGCA AGTGCTGTCG CAGGCTGGCG CGAAGGTCGT GCTCGCGAGC
CGGCGCGTCG AGCGCCTGAA GGAGCTGCGC GCGGAAATCG AGGCGGCGGG CGGCGCCGCG
CACGTGGTCT CGCTCGACGT CACCGATTAT CAGAGCATCA AGGCGGCTGT CGCGCACGCG
GAAACCGAAG CGGGCACGAT CGATATCCTC GTCAACAATT CGGGCGTGTC GACGATGCAG
AAGCTCGTCG ACGTGACGCC CGCAGATTTC GAATACGTAT TCGATACGAA CACGCGCGGC
GCATTTTTCG TCGCGCAGGA AGTCGCGAAG CGGATGATGA TGCGCGCGGG CAACGGCAAC
GCGAAACCGG CTTGCCGGAT CATCAACATC GCGTCGGTCG CCGGGCTGCG GCCGTTCTCG
CAGATCGGCC TTTACGCGAT GAGCAAGGCG GCCGTCGTCC ACATGACGCG GGCGATGGCG
CTCGAATGGG GCCGCCACGG CATCAACGTC AACGCGATCT GCCCCGGCTA CATCGATACC
GAGATCAATC ACTCCCTGTG GGAAACCGAG CAGGGCCAGA AGCTGCAGTC GATGCTGCCG
CGCCGGCGCG TCGGCAAGCC GCAGGATCTC GACGGGCTGC TGCTGCTGCT CGCCGCGGAC
GAGTCACAGT TCATCAACGG CTCGATCGTG TCGGCCGACG ACGGCCTCGG TCTCGCGTGA
|
|---|
| Protein sequence | MGRSINLEGK VAFITGASSG LGQRFAQVLS QAGAKVVLAS RRVERLKELR AEIEAAGGAA
HVVSLDVTDY QSIKAAVAHA ETEAGTIDIL VNNSGVSTMQ KLVDVTPADF EYVFDTNTRG
AFFVAQEVAK RMMMRAGNGN AKPACRIINI ASVAGLRPFS QIGLYAMSKA AVVHMTRAMA
LEWGRHGINV NAICPGYIDT EINHSLWETE QGQKLQSMLP RRRVGKPQDL DGLLLLLAAD
ESQFINGSIV SADDGLGLA
|
|---|
| |