Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2253 |
Symbol | |
ID | 3846905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 2534047 |
End bp | 2535222 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637841922 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_442774 |
Protein GI | 83719070 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00391915 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCGTT CAAGTTCGTT GAATGCCCGT GCGGGCAAGT CAAACCGCGA CGATTATAGC CCAAGCGCCA GCCCCGCCGA CGCTTCTGCA GGCGATTCGC TCGACGACGA TCTGTCGAGC GACACGCTCG TCGCGCCCGC GGGCGCCGAT GCGCCGCGCG TCGTCGACGT ACCGCCCGCG CTCGCGGGCG AGCGCCTCGA CAAGGCGCTC GCGCAGTTGT TCCCCGAGTT CTCTCGCAGC CGCCTGCAGC AGTGGATCGA ATCGGAGCGT GTGCGCGTCG ACGGCGCGCC CGCGAAGATC CGGCAGGCCG TGCCGCTCGG CGCGACGATC GAGCTGCTGC CGGATCTGCT GCCCGAGCAA CTCGCGTTCA CGCCGGAGCC GGTGCCGCTT TCGATCGTCT ACGAGGACGA TACGATCGTC GTCGTAGACA AGCCGGCCGG CCTCGTCGTC CACCCGGCCG CCGGCAACTG GAGCGGCACG CTGCTCAACG GTCTGCTGCA CCGCTATGCG GATGCGGCCG GCCTGCCGCG CGCCGGGATC GTGCATCGGC TCGACAAGGA GACGTCGGGC CTGATGGTCG TCGCCCGCAC GCTCGCCGCG CAGACGGACC TGATCCGCCA ATTGCAGGCG CGCACGGTGA AGCGCCGCTA TTTCGCGCTC GTGTGGGGGC AGATGCCCGA CGAAGGCACG ATCGACGCGC CGATCGGCCG CGATCCGCGC GAACGCACGC GGATGGCGGT CGTCACGGGG GCGGCGGGCA AGCCGGCGCG CACGCATTTC CGCACCGTCG ACACGACGCC GTGGGAGCGT CAGCCGGTAT CGGCGATCCA TTGCGATCTC GAAACCGGGC GCACGCATCA GATCCGCGTG CATTGCGCGC ACGTCGGACA TCCGTTGCTC GGCGATCCGG TGTACGGCCG CGCGCGCGGC AAGCGCTCGG TCGCGCCGCT GCCGGGCGGC TTCGCGCGGC AGGCGCTGCA CGCATGGCGG CTCGGCCTCG TTCATCCGGC GACCGGCCGG TCGATGCAAT GGCGCGCGCC GCTGCCGGCC GATCTCGCGG CGCTCGTCGA TGCGCTCGGC TTCGGCGCGG ACGATGCGGA ATTCGGCGAC GACGACGCGG TCTATGACGA CGGTTACGAT GGAGGCATCC CGCATGCCGA CGACGAAGAG GATTGA
|
Protein sequence | MTRSSSLNAR AGKSNRDDYS PSASPADASA GDSLDDDLSS DTLVAPAGAD APRVVDVPPA LAGERLDKAL AQLFPEFSRS RLQQWIESER VRVDGAPAKI RQAVPLGATI ELLPDLLPEQ LAFTPEPVPL SIVYEDDTIV VVDKPAGLVV HPAAGNWSGT LLNGLLHRYA DAAGLPRAGI VHRLDKETSG LMVVARTLAA QTDLIRQLQA RTVKRRYFAL VWGQMPDEGT IDAPIGRDPR ERTRMAVVTG AAGKPARTHF RTVDTTPWER QPVSAIHCDL ETGRTHQIRV HCAHVGHPLL GDPVYGRARG KRSVAPLPGG FARQALHAWR LGLVHPATGR SMQWRAPLPA DLAALVDALG FGADDAEFGD DDAVYDDGYD GGIPHADDEE D
|
| |