| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2229 |
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| Symbol | rumA |
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| ID | 3847647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 2505596 |
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| End bp | 2507092 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637841898 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_442750 |
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| Protein GI | 83719402 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCAAC TGATGAGTCG CATCGTCGAA TCTCCGTTGC ATGGCGGCCG TTCGTCTACA
ATCTCGCCTT TCCCCACAAT CGTTCGTCAG GAAAAGCTGG TGTCAGAAGC CGTCCCTCTC
TCCACACCCG GCGCGTCGCA TGCGGGCGCC GCAACCGATC GCGCCCCGGT TCTCGATATC
GATTCGCTCG ACATGGAAGC GCGCGGCGTC GGCCGTGCCG TCGACGAAAA CGGCGAACCC
GGCAAGGTGA TTTTCGTCGA GGGCGCGTTG CCCGGCGAAC GCGTCACCTA TTCGAGTTTC
CGCCGCAAGC CGACCTACGA ACAGGCGCAG GTCGTCGATA TTCTGCGCCC GAGCGTGATG
CGCACGCGGC CGAAATGCGC ATTTTTCGGC ACATGCGGCG GCTGTTCGAT GCAGCATCTC
GACATGCGCG CGCAGGTCGC GATCAAGCAG CGCGTGCTCG AGGACAACCT GTGGCATCTC
GCGAAGCTGC GCGCCGAGGC GATGTTCGCG CCGATTCACG GCCCGTCGTG GGGCTACCGC
TATCGTGCCC GCCTCACCGT GCGCCACGTC GCGAAGAAGG GCGGCGTGCT CGTCGGCTTC
CACGAGAAGA AGAGCAGCTA CGTCGCCGAC ATGACGAGCT GCGAGGTGCT GCCGCCGCAC
GTGTCCGCGA TGCTGGTGCC GCTGCGCCGG CTCGTCGAGC AATTGTCGAT CCGCGATCGC
ATGCCGCAGA TCGAGCTTGC GGTCGGCTCG CAGGTGACGG CGCTCGTGCT GCGCGTGCTC
GAGCCGATCA ACGCGGCCGA CGAGACGCTC CTGCGCGAAT TCGCGGACGC GCATCGCGTG
CAGTTCTGGC TGCAGCCGAA AGGGCCGGAC ACGGTCGCGC CGTTCTATCC GCTCGACGTG
CAGCTCGACT ACACGCTGCC CGAATTCGGG ATCCGGATGC CGTTCAAGCC GACCGATTTC
ACGCAGGTCA ACCACCAGAT CAACCGCGTG CTCGTCGGTC GGGCGCTGCG CCTGCTCGCG
CCCGAGCGCG GCGACCGCGT GCTCGATCTG TTCTGCGGGA TCGGCAACTT CACGCTGCCG
CTCGCGCGGC TCGCTCGCGA GGTGGTCGGG ATCGAGGGCA GCGAGACGCT GACGTCGCGC
GCGCTCGCGA ATGCAAAGGA AAACGGCGTC GACGGGCATA CGTCGTTCGC GAGCCGCAAT
CTGTTCGAGG TGACGGCCGA CGATCTGCAC GCGCTCGGCG CATTCGACAA ATTCCTGGTC
GATCCGCCGC GCGAAGGCGC GCTCGCGGTG TCGAAGGCGC TCGCCGAGAT CGCGCAGAGC
GGCGAAGGGC CGCTGCCCGC GCGGATCGTC TACGTGTCGT GCAATCCGTC GACGCTCGCA
CGAGACGCGG GTCTCCTCGT GCACGAGGCA GGTTATCGGC TGAAGGGCGC GGGCGTCGTC
AACATGTTCC CGCACACGTC GCATGTCGAA TCGATCGCGC TCTTCGAGCG TGACTGA
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| Protein sequence | MFQLMSRIVE SPLHGGRSST ISPFPTIVRQ EKLVSEAVPL STPGASHAGA ATDRAPVLDI
DSLDMEARGV GRAVDENGEP GKVIFVEGAL PGERVTYSSF RRKPTYEQAQ VVDILRPSVM
RTRPKCAFFG TCGGCSMQHL DMRAQVAIKQ RVLEDNLWHL AKLRAEAMFA PIHGPSWGYR
YRARLTVRHV AKKGGVLVGF HEKKSSYVAD MTSCEVLPPH VSAMLVPLRR LVEQLSIRDR
MPQIELAVGS QVTALVLRVL EPINAADETL LREFADAHRV QFWLQPKGPD TVAPFYPLDV
QLDYTLPEFG IRMPFKPTDF TQVNHQINRV LVGRALRLLA PERGDRVLDL FCGIGNFTLP
LARLAREVVG IEGSETLTSR ALANAKENGV DGHTSFASRN LFEVTADDLH ALGAFDKFLV
DPPREGALAV SKALAEIAQS GEGPLPARIV YVSCNPSTLA RDAGLLVHEA GYRLKGAGVV
NMFPHTSHVE SIALFERD
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