| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2089 |
|---|
| Symbol | ispD |
|---|
| ID | 3848491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 2367630 |
|---|
| End bp | 2368340 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637841758 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_442613 |
|---|
| Protein GI | 83719809 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCC GACTCTTCGC CCTGATTCCG TGCGCCGGCA CCGGCAGCCG CTCCGGCTCG
GCATTGCCGA AGCAATACCG CACGCTCGCC GGCCGCGCGC TCCTGCATTA CACGCTCGCC
GCGTTCGACG CGTGCAGCGA GTTCGCGCAA ACGCTCGTCG TGATTTCCCC CGACGACGCC
CACTTCGACG CCCGCCGCTT TGCCGGTCTG CGCTTCGCGG TGCGGCGCTG CGGCGGCGCG
TCCCGACAGG CGTCGGTGAT GAACGGGCTG ATCCAGCTCG CCGAATTCGG CGCGACGGAC
GCCGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCCGGCA TCACGCCGGC GCTGATCCGC
ACGCTGATCG GCGCGCTGAA GGACGACCCC GTCGGCGGCA TCGTCGCGCT GCCGGTCGCC
GATACGCTCA AGCGCGTGCC GGCGGGCGGC GACGCGATCG AGCGCACCGA ATCGCGCAAC
GGCCTCTGGC AGGCGCAGAC GCCGCAGATG TTCCGCATCG GCATGCTGCG CGACGCGATC
CAGCGCGCGC AGCTCGAAGG TCGCGATCTG ACCGACGAAG CGAGCGCGAT CGAATGGGCG
GGCCATACGC CGCGCGTCGT GCAGGGCAGT CTGCGCAACT TCAAGGTCAC GTACCCGGAG
GATTTCGACC TCGCGGAGGC GATTCTCGCG CATCCGGCGC GCGCCAGTTG A
|
|---|
| Protein sequence | MTSRLFALIP CAGTGSRSGS ALPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVISPDDA
HFDARRFAGL RFAVRRCGGA SRQASVMNGL IQLAEFGATD ADWVLVHDAA RPGITPALIR
TLIGALKDDP VGGIVALPVA DTLKRVPAGG DAIERTESRN GLWQAQTPQM FRIGMLRDAI
QRAQLEGRDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFDLAEAILA HPARAS
|
|---|
| |