Gene BTH_I2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2079 
SymbolmscL 
ID3849083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand- 
Start bp2353950 
End bp2354381 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content58% 
IMG OID637841748 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_442603 
Protein GI83720069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.449669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCA TCAAGGAATT CAAGGAATTC GCCGTCAAGG GCAACGTCAT GGATCTCGCC 
ATCGGCGTGA TCATCGGCGG AGCGTTTTCG AAGATCGTCG ATTCGGTGGT GAAAGATCTC 
ATCATGCCCG TCATCGGCGT GCTGACGGGC GGCCTGGATT TCTCGAACAA ATTCGTGCTG 
CTCGGGCAGA TTCCCGCATC GTTCAAGGGC AATCCGGAAT CGTTCAAGGA TCTGCAGGCG 
GCGGGCGTCG CCACGTTCGG CTACGGCTCG TTCATCACCG TGCTGATCAA CTTCATCATT 
CTCGCGTTCA TCATCTTCCT GATGGTCAAG TTCATCAACA AGCTGCGCAA GCCGGAAGAA 
GCCGCGCCCG CCGCGACGCC CGAGGACGTG CTGCTGCTGC GCGAGATTCG CGATTCGCTG 
AAGCAGCGCT GA
 
Protein sequence
MSIIKEFKEF AVKGNVMDLA IGVIIGGAFS KIVDSVVKDL IMPVIGVLTG GLDFSNKFVL 
LGQIPASFKG NPESFKDLQA AGVATFGYGS FITVLINFII LAFIIFLMVK FINKLRKPEE 
AAPAATPEDV LLLREIRDSL KQR