Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2017 |
Symbol | |
ID | 3848550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 2282395 |
End bp | 2283657 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637841686 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_442541 |
Protein GI | 83721055 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTCA CGCCCGTGAA TCCTCGTCTC GACACGCTGC AGCCCTACCC GTTCGAAAAG CTCCGCGCGC TCTTTGCCGG CGTGACGCCA AGCGCGCATC TGCCGCCGAT CAGCTTCGGC ATCGGCGAGC CGAAGCACGC AACGCCCGCG CTGATCCGCG ACGCCGCGGC CGCCGCGCTC GACGGCCTCG CGTCGTATCC GGCGACGGCG GGCACCGATG CGCTGCGCGA GGCGCTCGCG CGCTGGCTCG AGCGGCGCTA CGGGCTGCCC GCGATCGACG CGACGACGCA GGTTCTCGCC GCGTCGGGCT CGCGCGAGGC GCTCTTCTCG CTCGCGCAGG CGGTGATCGA TTCGAGCCCG CGCGGCAACC GCGACAAGCA AGGCGGCGAA TGCCAAAACG GCGAAAGGCC GATCGTACTC TGTCCGAATC CCTTCTATCA AATCTACGAA GGCGCGGCGC TCCTCGCGGG CGCCGAGCCG TACTTCGTCA ACAGCGATCC GGCGCGCAAC TTCGCGCCCG ATTATTCGGT CGTGCCGGCC GACGTGTGGG CGCGCACGCA GCTCGTCTAC GTGTGCTCGC CGGGCAACCC GACGGGCGCC GTGCTGACCC TCGACGACTG GCGCAAGCTC TTCGCGCTGT CGGACGAGCA CGGCTTCGTG ATCGCGTCGG ACGAATGCTA TTCGGAGATC TACTTCGACG AGGCGAAGCC GCCGCTGGGC GGCCTCGAGG CCGCGCACAA GCTCGGCCGC GGGTTCGAGC GCCTCGTGAT GCTGTCGAGC CTGTCGAAGC GCTCGAACGT GCCGGGCATG CGCTCGGGTT TCGTCGCGGG CGACGCGGCG CTCCTCAAGC GCTTCCTGCT GTACCGCACC TACCACGGCG CGGCGCTGTC GCCCGTCTGG CAGAAGGCGA GCGTCGCCGC CTGGGGCGAC GAGGCGCACG TGCGCGAGAA CCGCGCGCTC TACGCGCAGA AGTTCGCGAC CGTCACGCCG ATGCTCGCCG ACGTCGTCGA CGTGCGCCTG CCCGACGCCG CGTTCTACCT GTGGGCGAAC GTCGCGCGAA CCGGCCTGTC GGACACCGAG TTCGCCCGGC GCCTCTACGC CGACTATAAT GTGACGGTCC TGCCCGGCTC GTATCTCGCC CGCGACGCGC ACGGCGCGAA TCCCGGCCGC GACTTCGTCC GGATCGCGCT CGTCGCCGGC ACGGCCGAAT GCGCCGAAGG CGCGCAGCGC ATCGTCGATT TCTGCCGCGG CCTCGCCCGC TGA
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Protein sequence | MSLTPVNPRL DTLQPYPFEK LRALFAGVTP SAHLPPISFG IGEPKHATPA LIRDAAAAAL DGLASYPATA GTDALREALA RWLERRYGLP AIDATTQVLA ASGSREALFS LAQAVIDSSP RGNRDKQGGE CQNGERPIVL CPNPFYQIYE GAALLAGAEP YFVNSDPARN FAPDYSVVPA DVWARTQLVY VCSPGNPTGA VLTLDDWRKL FALSDEHGFV IASDECYSEI YFDEAKPPLG GLEAAHKLGR GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKRFLLYRT YHGAALSPVW QKASVAAWGD EAHVRENRAL YAQKFATVTP MLADVVDVRL PDAAFYLWAN VARTGLSDTE FARRLYADYN VTVLPGSYLA RDAHGANPGR DFVRIALVAG TAECAEGAQR IVDFCRGLAR
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