Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2016 |
Symbol | dapD |
ID | 3849120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 2281511 |
End bp | 2282338 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637841685 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_442540 |
Protein GI | 161723132 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.668641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAC AACTTCAGCA AATCATCGAT AACGCCTGGG AAAACCGCGC CGAGCTGTCG CCGAAGGCCG CATCCGCGGA AATCCGCGAA GCCGTCGCGC ACGCGATCGA GCAGCTCGAC CGCGGCGCGC TGCGCGTCGC CGAGAAGATC GACGGCGCAT GGACCGTGCA CCAGTGGCTG AAGAAGGCCG TGCTGCTGTC GTTCCGCCTG GAAGACAACG CACCGATGCC TGCGGGCGGC TACACGCAGT TCTACGACAA GGTGCCGTCG AAGTTCGCGA ACTACACCGC CGAGGATTTC GCCGCCGGCG GCTTTCGCGT CGTGCCGCCC GCGATCGCGC GCCGCGGCTC GTTCATCGCG AAGAACGTCG TGCTGATGCC GTCTTACACG AACATCGGCG CGTACGTCGA CGAAGGCACG ATGGTCGACA CCTGGGCCAC CGTCGGCTCG TGCGCGCAGA TCGGCAAGAA CGTGCACCTG TCGGGCGGCG TCGGCATCGG CGGCGTGCTC GAGCCGCTGC AGGCGAACCC CGTCATCATC GAGGACAACT GCTTCATCGG CGCGCGCTCG GAAGTCGTCG AAGGCGTGAT CGTCGAGGAG AACTCCGTGA TCTCGATGGG CGTGTACCTC GGCCAGAGCA CGAAGATCTA CGACCGCGAA ACGGGCGAAG TGACGTACGG CCGCATTCCG GCCGGCTCGG TCGTCGTCGC GGGCAACCTG CCGTCGAAGG ACGGCACGCA CAGCCTCTAC TGCGCGGTGA TCGTGAAGAA AGTCGACGCG AAGACCCGCG CGAAGGTCGG CCTGAACGAA CTGCTGCGGG GCGACTGA
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Protein sequence | MSQQLQQIID NAWENRAELS PKAASAEIRE AVAHAIEQLD RGALRVAEKI DGAWTVHQWL KKAVLLSFRL EDNAPMPAGG YTQFYDKVPS KFANYTAEDF AAGGFRVVPP AIARRGSFIA KNVVLMPSYT NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEVTYGRIP AGSVVVAGNL PSKDGTHSLY CAVIVKKVDA KTRAKVGLNE LLRGD
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