| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1978 |
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| Symbol | |
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| ID | 3846843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 2242670 |
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| End bp | 2244730 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637841647 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_442507 |
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| Protein GI | 83719183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00175999 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGCGTC CGCGCCCGCA TGGTCGGCAG GCGGCGGCTG GCTGTAACCG GTTGCGAATG
GGTAGAATTC TCTCACATCG CCATCCTCGA ACGACTGCCG ACACCTCCAT GACGATCGGT
TCGCCCCGGG CCCGCCGGCC GCGACCGCCG CGACGCGCGG CGACATCACA ACAGGCCGCG
CAAGCCCCCG CGCCGCAACG GGCGGCCCGC GCGCGCGCCG CGCTCGCGCG CTTTGCACGC
CGCACGGCGG CGCTCGTCGC GCTCGCGCTC GCCGCGGCGC CGGCGGCCCA CGCCGTCTAT
GCGATCGCGC AGTACGGCGA GCCCAAGTAT CCGCCCGGCT TCAAGCATTT CGACTACGTG
AACCCGGACG CGCCGAAGGG CGGCACGCTC GTGCTCGCGA ACCCGAACCG GCTCACGACG
TTCGACAAGT TCAATCCGTT CACGATGCGC GGCAATCCGG CGCCCGGGAT CGACCTGCTG
TTCGAGAGCC TGACGACGGG CAGCGCCGAC GAACCCGCCT CCGCGTACGG GCTGCTCGCG
GACGACATCG CCATCGCGCC CGACGGGCTG TCGGTCACGT TCCATTTGAA CCCGCGCGCG
CGCTTCTCGA ACGGCGATCC CGTTACCGCA GCGGACGTCA AGCATTCGTT CGATACGCTG
AAGAGCCCGC AGGCGGCGCC GCAATACCCG GCGTACTACG CGGACATCAC GCGCGCGGTG
ATCGTCAATC CGGAGACCGT GCGCTTCGAG TTTCGCCGCA AGAACCGGGA GCTGCCGCTG
ATCGCGGGCG GCATCCCGGT GTTCTCGAGC AAATGGGGCC TGCGGCCGGA CGGTTCGCGC
ATCCCGTTCG ACCAGCTCGC GTTCGAGCAG CCGATCGGCA GCGGCCCGTA CCTGATCGAG
CGCTACGACA CCGGCCGCAC GATTACCTAC CGGCGCAATC CCGCCTACTG GGGCGTGTCG
CTGCCCGTGC GGATCGGCAC GAACAACTTC GAGCGCATCG TCTACAAGCT GTACGGCGAC
GGCGTCGCGC GGCTCGAGGC GTTCAAGGCG GGCGAATACG ACGTGCTCGT CGAGTACATC
GCGCGCAACT GGGTTCGGCG CGATGTCGGC AAGCGCTTCG ACAGCGGCGA GCTCGTCAAG
CGCGAGTTCC GCCAGCACAA CGGCGCGGGC ATGCAGGGCT TCTTCATGAA TCTGCGGCGG
CCGTTGTTCC AGGACGTGCG CGTGCGCCAC GCGCTCGATC TCGCGTTCGA TTTCGAGTGG
CTGAACCGGC AACTCTTCTA TGGCGCCTAC ACGCGTCTGA ACAGCTACTT CGCCGATACC
GACCTGCAGG CGACGGGCAT GCCGGGCGCG GGCGAGCTCG CGCTGCTCAA TCCGTTGCGC
GCGCAGCTCG ACGCGGCCGT GTTCGGGCCG ATGACCGTGC AGCCGAGCAC CGATCCGCCC
GCGTCGCTGC GCGCGAACCT GCTGAAGGCG CGCGCGCTGC TCGCCGATGC CGGCTGGACC
TACCGCGACG GCGCGCTGCG CAACGCGAAG GGCGAGCCGT TCGTGTTCGA GATCCTCGAC
GATTCGGGCT CGGCGTTCGA GGCGGTCGCC GCCGCGTACA TCCGCAATCT CGCGAAGCTC
GGGATCGTCG CGAAATACCG GACGGCCGAT TTCGCGCTGC TGCAAAAGCG TCTCGACGCG
TTCGACTACG ACGTGACGAC GGTTCGCTAC CCGGGCGTCC AGGTGCCGGG CGCCGAGCAG
GTCGCGCGCT TCGCGAGCCG CTACGCGGAC GAGCAGGGCT CGGACAACCT GATCGGGCTC
AAGTCGCCCG CGGTCGATGC GATCCTGAAG GCGCTCACGC AGGCCGAGAC GCGTCAGGAA
CTGCTCGACG CGACGCACGC GCTCGACCGC GTGCTGATGC ACGGCTACTA TGCGGTGCCG
CAGTGGTACA GCGCGACGCA CCGGATCGCG TTCAAGCGCA CGCTTGCCTA TCCGTCGACG
CTGCCGCTGT ACTATTCGGC GGAAGGCTGG GTTGTGTCGA CGTGGTGGGC GAAGCCCGAG
CATGGCACCC CCGCGCGTTA G
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| Protein sequence | MWRPRPHGRQ AAAGCNRLRM GRILSHRHPR TTADTSMTIG SPRARRPRPP RRAATSQQAA
QAPAPQRAAR ARAALARFAR RTAALVALAL AAAPAAHAVY AIAQYGEPKY PPGFKHFDYV
NPDAPKGGTL VLANPNRLTT FDKFNPFTMR GNPAPGIDLL FESLTTGSAD EPASAYGLLA
DDIAIAPDGL SVTFHLNPRA RFSNGDPVTA ADVKHSFDTL KSPQAAPQYP AYYADITRAV
IVNPETVRFE FRRKNRELPL IAGGIPVFSS KWGLRPDGSR IPFDQLAFEQ PIGSGPYLIE
RYDTGRTITY RRNPAYWGVS LPVRIGTNNF ERIVYKLYGD GVARLEAFKA GEYDVLVEYI
ARNWVRRDVG KRFDSGELVK REFRQHNGAG MQGFFMNLRR PLFQDVRVRH ALDLAFDFEW
LNRQLFYGAY TRLNSYFADT DLQATGMPGA GELALLNPLR AQLDAAVFGP MTVQPSTDPP
ASLRANLLKA RALLADAGWT YRDGALRNAK GEPFVFEILD DSGSAFEAVA AAYIRNLAKL
GIVAKYRTAD FALLQKRLDA FDYDVTTVRY PGVQVPGAEQ VARFASRYAD EQGSDNLIGL
KSPAVDAILK ALTQAETRQE LLDATHALDR VLMHGYYAVP QWYSATHRIA FKRTLAYPST
LPLYYSAEGW VVSTWWAKPE HGTPAR
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