Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1948 |
Symbol | |
ID | 3846942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 2195291 |
End bp | 2197174 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637841617 |
Product | outer membrane autotransporter |
Protein accession | YP_442477 |
Protein GI | 83718407 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACCA AATATCGAGG GACGGCGCTC CGCCGAATGA AAATCGATTC GAAGCAAACG CGCGCGGTTG CGGCGATCGC GCTCGGCATC GCGCTGGCGC TGCCCGCGGC GGCCTGCGCC CAAGCGTTCT ACGCGCTCGG CGACAGCCTG ACCGACAACG GCCGCGTCGT CAGGTTGACC GGCATCCTGC CGAACGCGAC GTCGACGATC TTTCGCAACG GCCGCTCGTC GAACGGCCCG GTGTGGGCCG AATACTTGCC GAGCCTGATC GGCGCGCGAT TCGCGCCCGA TGACGATTAC GCGATCAACG GCGCGCTGAG CGGGCACGGC GGCTATCTCA ACATCATCCC GACGCGCCCG ACTTGGCGCT CGCTGCCCGG GTTCGTCGAT CAGGTCGATC AACTGATCGC CGCGCATCCG CGCTTGCGGG GCGACGATCT GGTCGGCATC TGGATCGGCA CCAACGACCA GGATCTGACC AAGGCGAGCC TGAACGGCAT CGAGCCGTTT CTCGGCGTGC CCCGGCCGGC CAACATCGCG GAAATGAGCG CGTACACGCT CACGAACCTC AATGCGCAGG TGCGGCGGTT GATCGGGATC GGCGCGCGCC AGTTCGTGAT CCTGAACTTG AACGACGCCA ACGGCACGCG GCCCGGATAT GTCGACTACA ACGGCAAGCT GCCCGCGGAT CTCGTGCAGT TCTCGCGGCA AGGTGTCAAC GTTCACCTGT TCGACGTGTC GGGCCTGCTG AACCAGATGC GCCGCAATCC GTCCGCATAC GGGCTGAACG ACGCGCCGGA CGTGCAATGC CGCCACGTGC CGTCCTGCAA CGGCGGCGTC GTCGGCCTGC AAAACACCTA TCTCACGGCG GACGGCACGC ACATGATGAC GAGCGTGCAC GAGTACATCG CTCTCTACCT CGCGAATCAG CTGAATGCGC CGGCCGCGAT CTCGACCGCG CCGGCGCTCG GGCTCGACGT CGCCCGGGCG AGCGCGCTGT CGGCGCTGAA CATGACCGAC AGCGGGCCGC TCGGTGCGCC GCGTGTCGCG CTGTCGGACA AGCTGTCGCT GTTCGCCGAC GTCGGCTATA CGCGCAACTT TCACGGCGCG GCAAACGGCA TCGACGCGTT CGACAGCGAT GTCGAGATGT TCTCGATCGG CGCCGACTAC AAGCTGTCCG CTGAGTCGAG CGCCGGCGCG CTCTTTTCGA GCGGCAACGC GAGCGGCTCG ATCGCCGGCG GGCAAGGGCG GATCGGGATG CATGCATACC GGCTCGGCTT CTATCATGCG TTCGACCGCG CCGGCCTGTT CGTGCGTTCG TACGTCGGCG CAGGCTGGAG CCAGTATCGG CTCGATCGCG GCGCCGTGCT GCCGGGGGCG ATCAGCGCGC ATACCACCGG CTTCGATTTC GGCGGGCTCG TCAAGGCCGG ATTCCTGTTC CCGCTTGGCG GCGCGCGGCT TGGCCCCGTT GCCGACATCG GGTACGCGCA GCTCGTCACG CGCGGCTACG CGGAGGAGGG CGACCCGATC CTCGCGCAGG ACGTCGGCGT GCAGCGGCTG AAGGGCGTAA GCGCCGGAGC GGGCGTGCGC TTCGCGGCGC CGCTCGCGGC GATCGGGCTG CGCGCCGGCG AGTTGTCCGC CGAGGCGCAC CTGCGGCACG ATGCGTTCGG CGACCGCACG CTCGTCACGG CCCAGCGTTA TGCGCCCGGT CTGCCGATCA GCACGGCCGT CGATGGCGCG AGCGCGACCT ATGAGCGGCT GTCGGTCGCG CTCACCGTGA ATCCCGCGAA GCGGTGGCGG GGCAAGCTCG CCGTGCAGGC GGATCTCGGC AACGCGCAGC GCCGTTCGTA CACGCTGCTC GCGCTGCTGG GCGGCACGTT CTGA
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Protein sequence | MHTKYRGTAL RRMKIDSKQT RAVAAIALGI ALALPAAACA QAFYALGDSL TDNGRVVRLT GILPNATSTI FRNGRSSNGP VWAEYLPSLI GARFAPDDDY AINGALSGHG GYLNIIPTRP TWRSLPGFVD QVDQLIAAHP RLRGDDLVGI WIGTNDQDLT KASLNGIEPF LGVPRPANIA EMSAYTLTNL NAQVRRLIGI GARQFVILNL NDANGTRPGY VDYNGKLPAD LVQFSRQGVN VHLFDVSGLL NQMRRNPSAY GLNDAPDVQC RHVPSCNGGV VGLQNTYLTA DGTHMMTSVH EYIALYLANQ LNAPAAISTA PALGLDVARA SALSALNMTD SGPLGAPRVA LSDKLSLFAD VGYTRNFHGA ANGIDAFDSD VEMFSIGADY KLSAESSAGA LFSSGNASGS IAGGQGRIGM HAYRLGFYHA FDRAGLFVRS YVGAGWSQYR LDRGAVLPGA ISAHTTGFDF GGLVKAGFLF PLGGARLGPV ADIGYAQLVT RGYAEEGDPI LAQDVGVQRL KGVSAGAGVR FAAPLAAIGL RAGELSAEAH LRHDAFGDRT LVTAQRYAPG LPISTAVDGA SATYERLSVA LTVNPAKRWR GKLAVQADLG NAQRRSYTLL ALLGGTF
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