| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1863 |
|---|
| Symbol | |
|---|
| ID | 3849943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2103751 |
|---|
| End bp | 2106291 |
|---|
| Gene Length | 2541 bp |
|---|
| Protein Length | 846 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637841532 |
|---|
| Product | sensory box histidine kinase |
|---|
| Protein accession | YP_442393 |
|---|
| Protein GI | 83720581 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.855198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGACG CGCTGAGCTA CAATCCTGCC ATGTTGACCG ATCGGCTTTT CGCTCGCTCG
GCGCGACCGT CGGGCTCGCC GGCGGAGTCG CAGCCGTCCC GCTGGCACCA CGGACCGTGG
TGGTCCAACT CTTACCTGCT CACCCCCCTG CTGTCGATCC TCGTCTTCCT CGTCGTGATG
AGCCTCATTC TGTGGAGCCT CAATCGCCGC GAGGAGCAGC AGCAGGAAGA CACGCTGTTT
CGCAACGTCG CGTGGGCGCA GCAGCAGATC CGCCTGTCGA TGACGAGCGC GCAAGAGCAG
CTCCAGGCGT TCTCGCGCGA CATCGCCGCG GGCCGCATCG ACGAGCATGC GTTCCAGACG
ACGGTGGGCG ACGTGATGCA GGCGCATCCC GAGATCCTCT ATCTGAACTG GTACACGTCG
CCCGGCACGA AACGCTGGCC GACGATGCAA TTGCCGGTAC TCGGCCAGCG GCTCGCGAAG
CCGGGCGACG CGCAGATGGA CGAAGTCGTG CGCGGCGCGT ATGCCCAGGC GCGCAGCACG
CGCCGTCAGT CGTACTCGCC GCTCGTCTAC GACGACTTCG GCAACGGCTA CCTGACGCTG
CAAACGCCCG TGATCCGCGA TCGCGAGTAC CTCGGCTCGA TCGCCGCGGT GTTCTCGGTC
GAAGGAATCC TGAAGCACGA CATCCCGCCC GAGCTGTCGG CGAAATACAA GATCTCGATC
ACCGACGCGA ACAACCGCGA GCTCGCGTCG ACGTCGTCGC GCCCGCGGCT GCCGCGCGAC
GCGCACTACG ACCTGCCGCT CGATCCGCCC GGCCAGGGCC TCACGGTGCG CGTGTACGCG
TACCCGCAGA CGACGAACCT GACCAACAAC ACGCTCGTGT GGCTCGTCGC CGGCCTGTCG
TGCTTCGTGC TGTGGAGCCT CTGGAGCCTG TGGAAGCACA CGCGGCAACG CTTCGAGGCG
CAGCAGGCGC TGTACGCGGA GGCGTTCTTC CGCCGCGCGA TGGAGAATTC GGTGCTGATC
GGCATGCGCG TGCTCGACAT GCACGGGCGG ATCACGCACG TGAATCCGGC GTTCTGCCGG
ATGACCGGCT GGGACGAAAG CGACCTCGTC GGCAAGACCG CGCCGTTCCC GTACTGGCCG
CGCGATGCGT ACCCGGAAAT GCAGCGCCAG CTCGACATGA CGCTGCGCGG CAAGGCGCCG
AGCTCCGGCT TCGAGCTGCG CGTGCGCCGC AAGGACGGCT CGCTCTTTCA TGCGCGCCTG
TACGTATCGC CGCTCATCGA CAGCGCCGGC CGGCAGACGG GCTGGATGTC GTCGATGACC
GACATCACCG AGCCGAAGCG CGCGCGCGAA GAGCTCGCGG CCGCGCACGA GCGCTTCACG
ACGGTGCTCG AAAGCCTCGA CGCCGCGGTG TCGGTGCTCG CCGCGGACGA AGCCGAGCTG
CTCTTCGCGA ACCGCTATTA CCGGCATCTG TTCGGCATCC GTCCGGACGG CCATCTCGAG
CTGTCGGGCG GCGGCTTCGA CACCGCGCAG GCGTCGTCGG ACTCGATCGA CATGGTCGAC
GCTTACGCCG GCCTGCCCGC CGCCGCGCTC ACCGAGAGCA CGGCGGACGC GCAGGAGGTG
TACGTCGAGA GCATCCAGAA GTGGTTCGAG GTGCGCCGCC AGTACATCCA GTGGGTTGAC
GGCCACCTCG CGCAGATGCA GATCGCGACC GACATCACGA CGCGCAAGAA GGCGCAGGAG
CTCGCGCACC AGCAGGAGGA GAAGCTGCAG TTCACGAGCC GGCTGATGAC GATGGGCGAG
ATGGCGTCGT CGATCGCGCA CGAGCTGAAC CAGCCGCTCG CCGCGATCAA CAACTACTGC
TCGGGTACGC TCGCGCTCGT GAAGAGCGGC CGCGCGTCGC CGGAGACGCT CGCGCCCGCG
CTCGAGAAGA CCGCGCAGCA GGCGCTGCGC GCCGGGATGA TCGTCAAGCG GATTCGCGAG
TTCGTCAAGC GCAGCGAGCC GAAGCGGCAG CCGTCGCGGG TCGCCGACAT CGTCGCCGAC
GCGGTCGGCC TCGCCGAGAT CGAGGCGAGA AAGCGCCGGA TTCGGATCGT CACCGAAATC
CGCGCAAGAA TGCCTATTAT TTATGTCGAC CCCGTGTTGA TCGAGCAGGT GCTCGTGAAC
CTGATGAAGA ACGCGGCCGA GGCGATGCAG GAGGCGCGGC CGCAGGCGGA GAACGGCGTG
ATCCGCGTCG TCGCCGACCT CGAATCGGGC TTCGTCGACA TCCGCGTGAT CGACCAGGGT
CCGGGCGTCG ACGAGGCGAC GGCCGAACGC CTGTTCGAAC CGTTCTACAG CACCAAGTCG
GACGGGATGG GCATGGGGCT CAATATCTGC CGCTCGATCA TCGAATCGCA TCGCGGGCGT
CTGTGGGTGG TCAACAACGT CGAGCCGGAC GGCTTCGTAT CGGGCGCGAC GTTCCACTGC
AGCCTGCCCA TTGGGGAACC GGAGGATCTC GGTCACGGAT CCGAGACATC GCCATCACAA
ACCGTAACGG GAGAGATATG A
|
|---|
| Protein sequence | MHDALSYNPA MLTDRLFARS ARPSGSPAES QPSRWHHGPW WSNSYLLTPL LSILVFLVVM
SLILWSLNRR EEQQQEDTLF RNVAWAQQQI RLSMTSAQEQ LQAFSRDIAA GRIDEHAFQT
TVGDVMQAHP EILYLNWYTS PGTKRWPTMQ LPVLGQRLAK PGDAQMDEVV RGAYAQARST
RRQSYSPLVY DDFGNGYLTL QTPVIRDREY LGSIAAVFSV EGILKHDIPP ELSAKYKISI
TDANNRELAS TSSRPRLPRD AHYDLPLDPP GQGLTVRVYA YPQTTNLTNN TLVWLVAGLS
CFVLWSLWSL WKHTRQRFEA QQALYAEAFF RRAMENSVLI GMRVLDMHGR ITHVNPAFCR
MTGWDESDLV GKTAPFPYWP RDAYPEMQRQ LDMTLRGKAP SSGFELRVRR KDGSLFHARL
YVSPLIDSAG RQTGWMSSMT DITEPKRARE ELAAAHERFT TVLESLDAAV SVLAADEAEL
LFANRYYRHL FGIRPDGHLE LSGGGFDTAQ ASSDSIDMVD AYAGLPAAAL TESTADAQEV
YVESIQKWFE VRRQYIQWVD GHLAQMQIAT DITTRKKAQE LAHQQEEKLQ FTSRLMTMGE
MASSIAHELN QPLAAINNYC SGTLALVKSG RASPETLAPA LEKTAQQALR AGMIVKRIRE
FVKRSEPKRQ PSRVADIVAD AVGLAEIEAR KRRIRIVTEI RARMPIIYVD PVLIEQVLVN
LMKNAAEAMQ EARPQAENGV IRVVADLESG FVDIRVIDQG PGVDEATAER LFEPFYSTKS
DGMGMGLNIC RSIIESHRGR LWVVNNVEPD GFVSGATFHC SLPIGEPEDL GHGSETSPSQ
TVTGEI
|
|---|
| |