Gene BTH_I1644 details

Gene Information

• Locus tag: BTH_I1644
• Symbol: rfaD
• ID: 3849983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 1853351
• End bp: 1854343
• Gene Length: 993 bp
• Protein Length: 330 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637841313
• Product: ADP-L-glycero-D-manno-heptose-6-epimerase
• Protein accession: YP_442181
• Protein GI: 83720621
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0451] Nucleoside-diphosphate-sugar epimerases
• TIGRFAM ID: [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTCA TCGTTACCGG CGCGGCCGGC TTCATCGGCG CGAACCTCGT CAAGGCGCTG 
AACGAGCGCG GCGAGACGCG CATCATCGCG GTCGACAACC TGACGCGCGC GGACAAGTTC 
AAGAATCTCG TCGATTGCGA GATCGACGAC TATCTCGACA AGACCGAATT CGTCGAGCGC 
TTCGCACGCG GCGATTTCGG CAAGGTGCGC GCGGTGTTCC ACGAAGGCGC CTGCTCGGAC 
ACGATGGAAA CCGACGGCCG CTACATGATG GACAACAACT TCCGCTACAG CCGCGCGGTG 
CTTGATGCGT GCCTCGCGCA GGGCGCGCAG TTCCTGTATG CGTCGTCGGC CGCGATCTAC 
GGCGGCTCGA GCCGCTTCGT CGAGGAGCGC GAGGTCGAGG CGCCGCTCAA CGTGTACGGC 
TATTCGAAGT TCCTGTTCGA TCAGGTGATC CGCCGCGTGA TGCCGGGCGC GAAAAGCCAG 
ATCGCGGGCT TTCGCTACTT CAACGTGTAC GGGCCGCGCG AGTCGCACAA AGGGCGCATG 
GCGTCGGTCG CGTTCCACAA CTTCAACCAG TTCCGCGCCG AGGGCAAGGT CAAGCTGTTC 
GGCGAGTACA GCGGCTATGG CCCGGGCGAG CAGACGCGCG ATTTCGTGTC GGTCGAGGAC 
GTCGCGAAGG TGAACCTGTA TTTCTTCGAT CATCCGGAGA AATCGGGCAT TTTCAATCTC 
GGCACCGGTC GCGCACAGCC GTTCAACGAC ATCGCGGCGA CGGTCGTCAA CACGCTGCGC 
GCGCTCGAAG GCCAGCCGGC GCTCACGCTT GCCGAGCAGG TCGAGCAGGG GCTCGTCGAA 
TACGTGCCGT TCCCGGACGC GCTGCGCGGC AAGTACCAGT GCTTCACGCA GGCCGACCAG 
ACGAAGCTGC GCGCGGCCGG CTACGATGCG CCGTTCCTGA CGGTGCAGGA AGGCGTCGAT 
CGCTACGTTC GTTGGCTGTT CGGCCAGCTG TAA 

 

Protein sequence

MTLIVTGAAG FIGANLVKAL NERGETRIIA VDNLTRADKF KNLVDCEIDD YLDKTEFVER 
FARGDFGKVR AVFHEGACSD TMETDGRYMM DNNFRYSRAV LDACLAQGAQ FLYASSAAIY 
GGSSRFVEER EVEAPLNVYG YSKFLFDQVI RRVMPGAKSQ IAGFRYFNVY GPRESHKGRM 
ASVAFHNFNQ FRAEGKVKLF GEYSGYGPGE QTRDFVSVED VAKVNLYFFD HPEKSGIFNL 
GTGRAQPFND IAATVVNTLR ALEGQPALTL AEQVEQGLVE YVPFPDALRG KYQCFTQADQ 
TKLRAAGYDA PFLTVQEGVD RYVRWLFGQL