| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1554 |
|---|
| Symbol | |
|---|
| ID | 3848528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1755618 |
|---|
| End bp | 1756691 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637841225 |
|---|
| Product | ABC transporter, membrane permease |
|---|
| Protein accession | YP_442098 |
|---|
| Protein GI | 83721578 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.562494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAT CGTGCGCGCC GGGCGCTTCG TGCTGCAAGC GCTGCAAACG GGCCGCGAGC
CGGCCCGCGC CGTACCCGCC GTCCGCGCCG GCTTCGTGCC CGCGCGCGGC GACCTCGTTC
CAGGAGTCGA AACACGTGGC TGCCCCTCTT AGCGGAAACG GAACCAGCGC GGCTGCCGCG
CACCGCACAT CGCCGCTGTC GGCGTTCGCC GACCGCTGGA TTCCGAAACT GGTGCTCGCG
CCGAGCGTCG CGATCGCCTT GATCTTCATC TACGGCTTCA TCGCCGTCAC CGGCTATCTG
TCGCTGACGA ATTCGCGGCT GTTGCCGAAC TACGACTTCG ACGGCTTCGG CCGCTATTCC
GACCTGTTCC AGAACGACGT CTGGTGGACG TCGGCCGCGA ACCTCGGCTG GTTCGGCCTG
CCGTTCATCG TGATCTGCGT CGTGCTGGGC CTCTTCCTCG CGATCCTGCT CGACCAGAAG
ATTCGCAACG AAGGCGCGCT GCGCGCGGTG TTCCTGTATC CGATGGCGCT GTCGTTCATC
GTCACGGGCA CCGCATGGCA GTGGATCCTG AATCCGGGCC TCGGCCTCGA GAAAGTGATG
CACGACTGGG GGTTCACGAG CTTCTCGTTC GGCTGGCTCG ACGATCCGGA CAAGGCGATC
TTCTGCGTGG TGATCGCGGC CGTCTGGCAA TCGACGGGCT TCGTGATGGC GCTCTTCCTC
GCCGGCCTGC GCGGCGTCGA CAGCGAGATC TTCAAGGCCG CGCAGGTTGA CGGCGCGACG
TTGCCGACGA TCTACCGCAA GATCGTGATC CCGAGCATGC GCCCGGTGTT CTTCTCGGTG
CTGCTGATTC TCTGCCACAT CACGATCAAG ACCTTCGACC TCGTCGTCGC GCTGACGGCG
GGCGGGCCCG GCACGTCGTC GTCGCTGCCC GCGATGTTCA TGTATACGTT CTCGTTCAAC
CGGGGGCAAC TCGGCGTTGG CGCGGCGTCG TCGGTGATGA TGCTCGCCAC CGTGGTGGCG
GTACTCGTGC CGCTGATGTA TCTGGAATCG AGGAGCACCC GCAATGCAGC CTAA
|
|---|
| Protein sequence | MRASCAPGAS CCKRCKRAAS RPAPYPPSAP ASCPRAATSF QESKHVAAPL SGNGTSAAAA
HRTSPLSAFA DRWIPKLVLA PSVAIALIFI YGFIAVTGYL SLTNSRLLPN YDFDGFGRYS
DLFQNDVWWT SAANLGWFGL PFIVICVVLG LFLAILLDQK IRNEGALRAV FLYPMALSFI
VTGTAWQWIL NPGLGLEKVM HDWGFTSFSF GWLDDPDKAI FCVVIAAVWQ STGFVMALFL
AGLRGVDSEI FKAAQVDGAT LPTIYRKIVI PSMRPVFFSV LLILCHITIK TFDLVVALTA
GGPGTSSSLP AMFMYTFSFN RGQLGVGAAS SVMMLATVVA VLVPLMYLES RSTRNAA
|
|---|
| |