Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1275 |
Symbol | secF |
ID | 3847638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 1423619 |
End bp | 1424569 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637840947 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_441822 |
Protein GI | 83719393 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGTT GGTCTTCAAC GTGGTCTCGC TCGTGACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCATCG CGGACTGCAT CTGTCCGTCG AATTCACGGG CGGCACGGTG ATCGAAGTGC AGTATCAGCA GACCGCGCAG CTCGAACCCG TGCGCGCGAC GCTCGGCACG CTCGGTTACG CCGACGCGCA GGTGCAGAAC TTCGGCACGT CGCGCAACGT GCTGATTCGC CTGCCGCTCA AGCAGGGCCT CACGTCCGCG CAGCAGAGCG ACCAGGTGAT GGCCGCGCTG AAGGCGCAGA ACGCCGACGT CGCGCTGCAG CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC AAGGAGCTCG CGACCGACGG CCTGCTCGCG CTCGCGTGCG TCGTGATCGG CATCGTCATC TATCTGTCGT TCCGCTTCGA ATGGAAGTAC GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCA TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCGGCGG TGCTCGCGGT GCTCGGCTAC TCGGTCAACG AATCGGTCGT CATCTTCGAC CGGATTCGCG AGACGTTCCG CCGCGAACGC AAGATGACCG TGCAGGAAGT GATCAACCAT GCGATCACGA GCACGATGTC GCGCACGATC ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA TTCGTCGGTG TTCGTCGCCG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAGGACCT CGTCAAGGAG AAGAAGTCCG CGCACGATCC GAACGATCCG AACGCAGGCG CGCAGGTATA A
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Protein sequence | MEFFRIRKDI PFMRHALVFN VVSLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQTAQ LEPVRATLGT LGYADAQVQN FGTSRNVLIR LPLKQGLTSA QQSDQVMAAL KAQNADVALQ RVEFVGPQVG KELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DVVIILGFFA FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KMTVQEVINH AITSTMSRTI ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLVKE KKSAHDPNDP NAGAQV
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