| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1178 |
|---|
| Symbol | |
|---|
| ID | 3847725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1323974 |
|---|
| End bp | 1324783 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637840850 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_441725 |
|---|
| Protein GI | 83719365 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC GCCCGAAAGG GAGCGGCGCG GTGAACCGGC TCGCGGGCAA GGTCGCCCTC
GTGACGGGCG CGGGACGCGG CATCGGCGCG GCGATCGCGC GTGCGTTCGC GCGCGAAGGC
GCGGCCGTCG CGATTGCGGA GCTCGACGCG GCGCTCGCCG ACGAAACCGT CGACGCGATC
GCGCGCGACG TGGCCGATGC GCGCGTGCTC GCGGTGCCAG CGGACGTCGC GCAAGCCGAG
TCGGTCGCGG CGGCGCTCGC GTGCACGGAG CGCGCGTTCG GCCCGCTCGA CGTGCTCGTC
AACAACGCAG GCGTCAACGT GTTCGGCGAT CCGCTCGCGC TTGCCGAAGA AGACTGGCGG
CGCTGCTTCG CGATCGATCT CGACGGCGTC TGGCACGGCT GCCGCGCGGC GCTGCCGGGC
ATGGTCGAGC GCGGTCGGGG CAGCATCGTG AACATCGCGT CGACGCACGC GTTCAAGATC
ATCCCGGGCT GCTTTCCGTA CCCGGTCGCG AAGCACGGCG TGCTGGGCCT CACGCGCGCG
CTCGGCGTCG AATATGCGCC GCGCAACGTG CGCGTGAACG CGATCGCGCC CGGCTACATC
GAGACGCAAT CGACACATGA CTGGTGGAAC GCGCAGCCCG ACCCCGAGGC CGCGCGCCGC
GAAACGCTCG CACTGCAGCC GATGAAGCGG ATCGGGCGTG CGGACGAAGT CGCGATGACC
GCGGTGTTTC TCGCATCGGA CGAGGCGCCG TTCATCAACG CGAGCTGCAT CACGATCGAC
GGCGGCCGAT CGGTGCTGTA CCACGACTGA
|
|---|
| Protein sequence | MADRPKGSGA VNRLAGKVAL VTGAGRGIGA AIARAFAREG AAVAIAELDA ALADETVDAI
ARDVADARVL AVPADVAQAE SVAAALACTE RAFGPLDVLV NNAGVNVFGD PLALAEEDWR
RCFAIDLDGV WHGCRAALPG MVERGRGSIV NIASTHAFKI IPGCFPYPVA KHGVLGLTRA
LGVEYAPRNV RVNAIAPGYI ETQSTHDWWN AQPDPEAARR ETLALQPMKR IGRADEVAMT
AVFLASDEAP FINASCITID GGRSVLYHD
|
|---|
| |