| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0994 |
|---|
| Symbol | |
|---|
| ID | 3848502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 1131938 |
|---|
| End bp | 1133200 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637840666 |
|---|
| Product | major facilitator superfamily protein |
|---|
| Protein accession | YP_441548 |
|---|
| Protein GI | 83719723 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCC GGCATGCAGT CAGCGCGCGG AGCCTGCGCG CCCTCGACTG GCTCAACTTT
TTCGTCGCGA ACGTGCAGAC GGGCTTCGGG CCGTTCATCG CGTCGTATCT CGCCTCGCAC
AAGTGGACGC AGGGCGAAAT CGGCATGGCG CTGTCGATCG GCACGATCAG CGCGATGGTG
AGCCAGGTGC CGGGCGGCGC GGCTGTCGAC GCGCTGAAGA ACAAGAAAGG CGCGGCCGCG
TGGGCGATCG CCGCGATCAT CCTGTCCGCG GTGCTGCTCG CCGCGAGCCC GACCGTCGTG
CCCGTGATCG CGGCCGAGGT GTTCCATGGC TTCGCGAGCT GCATGCTCGT GCCGGCGATG
GCGGCGATCT CGTTCGCGCT CGTCGGCCGC GAGAGCCTCG GCGACCGGCT CGGCCGCAAC
GCGCGCTGGG CGTCGCTCGG CAGCGCGGTC GCGGCGGGCC TGATGGGGCT CACGGGCGAG
TACTTCTCCG CGCGCGCGGT GTTCTGGCTG ACGGCGGCGC TCGCGCTGCC CGCGCTCGTC
GCGCTCGCGA TGATCGAGCC GACGCACCAT CATCATCACG CGGCGCCGCG CGCATCCGCG
CCGCGCGACG GCACCGACGA AGACGAAGAG CGCGAAACGC TGCGCGAGCT GCTGCGCGAC
AAGCGGATGC TGATCTTCGC CGCGTGCGTC GTGCTGTTCC ACCTGTCGAA CGCGGCGATG
CTGAACCTCG CCGCGGGCGA AGTGACGGCG GGCATGGGCG AGAACGTGCA GCTCGTGATC
GCCGCGTGCA TCATCGTCCC GCAGGCGATC GTCGCGATGC TCTCGCCGTG GGTCGGCCGC
TCCGCGCAGC GCTGGGGCCG CCGGCCGATC CTGCTGCTCG GCTTCGCCGC GCTGCCGCTG
CGCGCACTGC TGTTCGCCGG CGTGTCGAGC CCGTACCTGC TCGTGCCCGT GCAGATGCTC
GACGGCATCA GCGCCGCCGT GTTCGGCGTG ATGCTGCCGC TCATCGCCGC CGACGTCGCG
GGCGGCAAGG GGCGCTACAA CCTGTGCATC GGGCTCTTCG GCCTCGCGGC GGGCGTCGGC
GCAACGCTCA GCACCGCGCT CGCAGGCTTC GCGGCCGACC ACTTCGGCAA CGCGATGAGC
TTCTTCGGGC TCGCCGCCGC AGGCGCGCTG GCGACGCTGC TCGTATGGTT CGCGATGCCC
GAGACGCGCG ATGCGACGCT CGCCGAAGAC GCGCAGCGCC CGAGCGCCGA GCCGGCGCAG
TGA
|
|---|
| Protein sequence | MTVRHAVSAR SLRALDWLNF FVANVQTGFG PFIASYLASH KWTQGEIGMA LSIGTISAMV
SQVPGGAAVD ALKNKKGAAA WAIAAIILSA VLLAASPTVV PVIAAEVFHG FASCMLVPAM
AAISFALVGR ESLGDRLGRN ARWASLGSAV AAGLMGLTGE YFSARAVFWL TAALALPALV
ALAMIEPTHH HHHAAPRASA PRDGTDEDEE RETLRELLRD KRMLIFAACV VLFHLSNAAM
LNLAAGEVTA GMGENVQLVI AACIIVPQAI VAMLSPWVGR SAQRWGRRPI LLLGFAALPL
RALLFAGVSS PYLLVPVQML DGISAAVFGV MLPLIAADVA GGKGRYNLCI GLFGLAAGVG
ATLSTALAGF AADHFGNAMS FFGLAAAGAL ATLLVWFAMP ETRDATLAED AQRPSAEPAQ
|
|---|
| |