Gene BTH_I0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0972 
Symbol 
ID3848032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand+ 
Start bp1098152 
End bp1098784 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID637840644 
ProductTetR family transcriptional regulator 
Protein accessionYP_441526 
Protein GI83720278 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.299865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CAAAAATCAA AAGAGACCCA GAGGGAACCC GGCGCCGGAT CCTGCTCGCG 
GCGGCCGAAG AGTTCGCGAC AGGGGGGCTG TTCGGTGCGC GAGTCGATCA GATCGCGCGC 
CGCGCCGAAA CCAACGAGCG CATGCTCTAT TACTACTTCG GCAGCAAGGA GCTGTTGTTC 
ACCGCAGTGC TCGAATATGC GTTTTCCGCG TTGATGGAGG CCGAGCGGAC GATCGACCTG 
GACGGCGTCG CGCCCGTCGA GGCGATCACG CGGCTCGCGC ATTTCGTGTG GGACTATTAC 
CGCGATCATC CCGATCTGCT GCGCCTGCTC AACAACGAGA ACCTGCACGA GGCGCGCTAT 
TTGCAGAAAT CGACGCGCAT CCGCGAGATG ATCTCGCCGA TCGTCAAGAC GCTCGACGGC 
GTGCTCGAGC GCGGTCAGAA GGCGGGGCTC TTTCGCACCG ACATCGATCC GCTGCGGTTC 
TACGTGACGT TATCGGGGCT CGGCTACTAC ATGGTGTCGA ACCGCTTCAC GCTCGCCGCG 
ATATTCGGGC GCGATTTCAG CGTGCAGCAG GAGCGTGCCG AGATGATCAA GATGAACACC 
GAGTTGCTGC TGGCGTTTCT GTTGAGGCGC TGA
 
Protein sequence
MNQPKIKRDP EGTRRRILLA AAEEFATGGL FGARVDQIAR RAETNERMLY YYFGSKELLF 
TAVLEYAFSA LMEAERTIDL DGVAPVEAIT RLAHFVWDYY RDHPDLLRLL NNENLHEARY 
LQKSTRIREM ISPIVKTLDG VLERGQKAGL FRTDIDPLRF YVTLSGLGYY MVSNRFTLAA 
IFGRDFSVQQ ERAEMIKMNT ELLLAFLLRR