Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0519 |
Symbol | |
ID | 3848601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 585303 |
End bp | 587639 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637840192 |
Product | EAL/GGDEF domain-containing protein |
Protein accession | YP_441076 |
Protein GI | 83721534 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGA CTTGCCGTTT TCGGCGATGC ATCGATGGCT TCCGTCCCCA GTCGACCGTC TCGCGGACCG AACGCGCGGT GCGTCCGGTC CGTGCGCCCG GCCGTCGCGA TCGCGCTGAC GGCGGCCTTG CTCGGCGCGG CGCTGCTGTC CGCCGAGCTG CACGGCGTCG TGCCCGGCCG CGCGCCGACG CGATCGAGCG CGTGTTCGGC GCGATCGGCA TGCGCGAGCG GCGCGCGCAC GATGCGACGT GCACGGCGGG TGCGAACGCG TCGGATGCGC CGCGTGCATG GCGGTTCGAA CCCGCTCGCG CGTACACGGC CGCCGCCGCG CATCCGGCGC GGGGCGAGGC GCGCGGCCCC GGCGTCGACG TTGCGCCGAA CCCGATGCCG CGATCGCCCG AAGCGGGCGC CGCGGCGCTC CCACAATCGC AACCGTACCT GGACATGATC GATTCGACGT TTCGCGAGCC GGCCGCCATC GCGCTCGCTT TGAGCCTGCT CGGCATGCTC GCGCTTGCGC TGCTGCCCGT GTTCCGGATC AGACGGCTCG CGCTTCGCCT CGGCGAGGCG GAGGGCGCGC TCGCGATGAG CGAAGCGCGA GCGCGCGCGG CGCTCGTCGC CGTCGGCGAC GGCGTGATCT TCACCGGGCG GGCGGGGCGA GTCGAATGCT TGAATCCGGC GGCGGAGCAG TTGATCGGCA TGCTCGCCGA CGATTGTCGC GGCCGCCCGC TCGTGTCGAC GCTGCGCCTC GCGCGCGCGG GCGCCGAGGC GGGCGGCCCG TCCGACGTGT TCGATTGGTC CGATGCGTGC GCTTCGTCCG GTTCGGCCGC CTCGTGCGAC GCGCCGCTCG GCGGTCTCGA GGATGGCGGC AGTTGCGACG CGACGCTGTA CCGCGCCGAC GGCGGCGCGA TCGCCGTGCG CGCCACCGCG TCGTCGATCG CGCCGCCGTC CGGGCACGCG CGGCGCGCAT GCGGCAGCGG CCGCGTGCTC GTGCTGAAGA GTCTCGCGGC CGAGCACGAT CTCGTGCGCC GCCTGGCGCG GCAGACGACG CACGATCCGC TCACCGGCCT GCCGAATCGC GCCGAGTTCG AACGCCGCGT CGATTTCGCG CTCGCGGCCA ACGTGCGCGG GCCGGTCGCG CTGCTGTTCA TCGATCTCGA CTGCTTTCGG ATCGTCAACG ACACGTGCGG CTACGCGGCG GGCGACGCGA TGCTCGCCGC GCTCGCCGCG CGCCTCGTGG CGTGCGCGGC GTCGACCGAC GTCGTCGCGC GGCTCGGCGG CGACGAATTC TGCGTGCTGC TCGACGCGGG CGACGAAGCG TCGGCCGCGT GCGCGGCCGA GCGCCTGCGC GCGAGCGTCG ACGGTTTCGT GTTCGTCTGG GAGGGCCAGC CGTTCTCGGT GACGGCGAGC GTCGGCGTCG CGTTGCTCGG CGCGCCGGAC CGCGTGCCGC GCGTCGAGGA TGCGGTGCGC CTTGCCGGCA TCGCGTGCGA CTTCGCGAAG GCGCGCGGGC GCAACCGCGT GCAACTGGCC GATCCGCACG ACCACGAGCT CGCGCACCAT ATCAATGACG TGTCGTGGTG CGCGCGCGTG AGGCAGGCGC TCGAATGCGA CGATTTCTGC CTGTACGTGC AGCCGATCGT CGATACGGCG ACGCAAGGCG CGAGCCGCCC GCCGCGCGCG AGGCGGGGCG AGCTGCTGCT GCGGATGGGC GCGCTCGGCG AGCGCGAGGG CGTCGCGCCG CCGGGGCATT TCATTCGCGC GGCCGAACGC TACGGGCTCG TGACGGACAT CGACCGCTGG GTCGTGCGCA CGGTGTTCGA CGCGCTCGCT CGCGCGCGCA GCCGGCGCTT CAGCGAATAC GCGATCAATC TGTCGGGAAT CTCGATCGGC GACGAGCGCT TTCTCGATTA CGTGCTCGAG CAGTTCGCAC GGACGCGCGT CGCGCCCGCG CTGATCTGCT TCGAGATCAC CGAGACGGCC GCGATCGCGA ACCTCGCCGG CGCGCTGCGA TTCATGCATG AGCTCAAGGC GCTCGGCTGC CGGTTCGCGC TCGACGATTT CGGCTCGGGG ATGGCGTCGC TCAGTTATCT GAAGCAACTG CCCGTCGAGT ACCTGAAGAT CGACGGCAGC TTCGTGACGG GCATCGCGAA CGACGCAGCG AGCCTCGACA TCGTCGCGTC GATCAACGAC ATCGGGCATG CGATGAATTG CAAGACGATC GCCGAGTACG TCGATAGCGC CGCGACGCTG CAAAAGCTCG CCGCGCTCGG CGTCGATTAT GCGCAGGGCT ATTACATCGG GCGGCCCGTG CCGTGGCGCG AGGCGGCGCG TTCGTAG
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Protein sequence | MNATCRFRRC IDGFRPQSTV SRTERAVRPV RAPGRRDRAD GGLARRGAAV RRAARRRARP RADAIERVFG AIGMRERRAH DATCTAGANA SDAPRAWRFE PARAYTAAAA HPARGEARGP GVDVAPNPMP RSPEAGAAAL PQSQPYLDMI DSTFREPAAI ALALSLLGML ALALLPVFRI RRLALRLGEA EGALAMSEAR ARAALVAVGD GVIFTGRAGR VECLNPAAEQ LIGMLADDCR GRPLVSTLRL ARAGAEAGGP SDVFDWSDAC ASSGSAASCD APLGGLEDGG SCDATLYRAD GGAIAVRATA SSIAPPSGHA RRACGSGRVL VLKSLAAEHD LVRRLARQTT HDPLTGLPNR AEFERRVDFA LAANVRGPVA LLFIDLDCFR IVNDTCGYAA GDAMLAALAA RLVACAASTD VVARLGGDEF CVLLDAGDEA SAACAAERLR ASVDGFVFVW EGQPFSVTAS VGVALLGAPD RVPRVEDAVR LAGIACDFAK ARGRNRVQLA DPHDHELAHH INDVSWCARV RQALECDDFC LYVQPIVDTA TQGASRPPRA RRGELLLRMG ALGEREGVAP PGHFIRAAER YGLVTDIDRW VVRTVFDALA RARSRRFSEY AINLSGISIG DERFLDYVLE QFARTRVAPA LICFEITETA AIANLAGALR FMHELKALGC RFALDDFGSG MASLSYLKQL PVEYLKIDGS FVTGIANDAA SLDIVASIND IGHAMNCKTI AEYVDSAATL QKLAALGVDY AQGYYIGRPV PWREAARS
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