Gene BTH_I0224 details

Gene Information

• Locus tag: BTH_I0224
• Symbol: dppF
• ID: 3848946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 257358
• End bp: 258374
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637839897
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_440782
• Protein GI: 83720790
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAG TCCACGAAAC GCGCGAAGCC GCCGCGCGCG ACGACATCGT GCTCGTCGCG 
GACAATCTCG CGAAGCACTA CACGGTGCGG CGCGGGATGT TCGGCCACGG CACCGTGAAG 
GCGCTCAACG GCGTGTCGTT CTCGCTCGCG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAA 
TCCGGCTGCG GCAAGTCGAC GCTCGCGCGG CAGCTCACGA TGATCGAGCC GCCGAGCTCG 
GGGCACTTGT CGATCGACGG CCGAGACGTC GCGGGCGCGG ACAGGGAGAC GGTCGCCGCG 
CTGCGCCGCC GCGTGCAGAT GGTGTTCCAG AATCCGTTCG CGTCGCTCAA TCCGCGCAAG 
ACGGTCGAGC AGACGCTCGC CGAGCCGCTC GCGATCAACA CGCATCTGAC GGCCGCGGAG 
CGCGCGCAGC GGATCGCGCA GATCATGCAC ACGGTGGGCT TGAGGCCCGA GCATGCGAAG 
CGCTATCCGC ACATGTTCTC GGGCGGGCAG CGCCAGCGCG TCGCGATCGC GCGCGCGATG 
ATCCTCGATC CGCAGATCGT CGTCGCCGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC 
CAGGCGCAGA TCCTGAATCT CTTCATGGAT CTGCAGGAGC AGTTCAAGAC GAGCTACGTG 
TTCATCTCGC ACAACCTCTC TGTCGTCGAG CACATCGCCG ACGACGTGAT GGTGATGTAC 
TTCGGCAGCG TCGCGGAGCT CGGCGACAAG AAGACGATCT ACGCGCGGCC GCGGCACCCG 
TACACGCGCG CGTTGATGTC GGCGACGCCC GCGATCTTCG AGGCGGATCG CAAGATCCAG 
ATCAAGCTGC AGGGCGAGCT GCCGTCGCCG CTCAATCCGC CGTCCGGCTG CGCGTTTCAT 
CAGCGCTGCC CGTACGCGGT CGAGCGGTGC CGCGCCGAGG AGCCGAAGCT GCGCGACGTC 
GATGGCCGGC TCGTCGCCTG CCATCGCGCC GAGGAGGTGG GGGAGGCGAA TGCCTGA 

 

Protein sequence

MNAVHETREA AARDDIVLVA DNLAKHYTVR RGMFGHGTVK ALNGVSFSLA RGKTLAVVGE 
SGCGKSTLAR QLTMIEPPSS GHLSIDGRDV AGADRETVAA LRRRVQMVFQ NPFASLNPRK 
TVEQTLAEPL AINTHLTAAE RAQRIAQIMH TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM 
ILDPQIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HIADDVMVMY 
FGSVAELGDK KTIYARPRHP YTRALMSATP AIFEADRKIQ IKLQGELPSP LNPPSGCAFH 
QRCPYAVERC RAEEPKLRDV DGRLVACHRA EEVGEANA