Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0132 |
Symbol | |
ID | 3847586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 161334 |
End bp | 163049 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637839805 |
Product | sun protein |
Protein accession | YP_440691 |
Protein GI | 83719791 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGCG CTGCGGGGTT CGGCGTTTTG GGTGGGTGGC CGTTTGCTCG ATCGAGGCTG CAAAATGCGG CTTGGGGGCG GCTGCGGACC GTGTCGATAC TGCGGCCGAA GCACCGAAGC ACCGAAGCAC CGAAGCACCG ACCGTACCGA ACGCGCCGAC ACATCGCCCG CCCAGCCACC CGAGGCCCGA ACCCCCGGCG CGCTACAATA TGCCGCTTAC CGGCCGACCG GCCGCGGGCC GGCCACCAAG GCACCTCCTA CCACTGCCCG GCGCGAGCGC GCGCCTCAGG CACTGCTGAT CCGATGACCC AGACTCGCCC TTCCCGTTCC CGCGCATCCG GCGCGCCCGC TCGTGCGCCG CGCCAGTCGG CGCTGCATCT CGTCCCCGAT TCGCTCGGCT TCGCGCTCGA CGGCGCCGCG CAAGCGGTCG ACGCGGTCAC TCGCGGCGCG GCGCTGCCCG CTGCGCTTGC GGCCGTCCAC GCGACGCTGC CTGCGAACGC GCGGGCGGCT TCGCGCGGCG CGATCCAGGA TATTGCGTAT CGCGCGATGC GTCGTCGCGG CACGGCCGAC TGGCTGATCG CGCAACTCGT CGCGAAGGCG CCGCCCGCGC ACGTGCATGC ACTTCTCGTC TGCGCGTTCG CGCTCCTCGT CGACGACGAC GAGCACGCCG CCTACGCGCC CTTCACCGTC GTCGATCAGG CGGTGACGGC GATCGGCGCG CGCCGCGAGT GCTCGTTTGC GAAGGGGCTC GTCAACGCGG TGCTGCGCCG CTTCCTGCGC GAGCGGGCCG TGTGGCTCGA GCGGTTGCAG TCCGATCGGC GCGCGCGCTG GAACTACGAG CCGTGGTGGA TCGACGCGGT CGAGCGTGCG TGGCCCGACG CATGGCCGCG CATTCTTGCC TCGGGCGACG CGCCCGGCCC GCTCACGCTG CGCGTGAACG CGCGCCGCAT GACGGCGGAT GCGTATCTCG ACGTGCTGCG TGCCGAGCGG ATCGATGCCG AGAAGGTCGG CCGTCACGCG ATACGGCTCG CATCGGCGCT GCCCGTCGAG CGCATTCCGG GTTTCGCGGA CGGCATCGTG TCGGTGCAGG ACGCGGGCGC GCAGCTCGCG GCCGAATGGC TCGGCGCGCG CGACGGCATG CGCGTGCTCG ATGCGTGCGC GGCGCCCGGC GGCAAGACGG GCCACATTCT CGAACTCGCG CACGCCGAGG TCGTCGCGCT CGAAAGCGAT CCTGCGCGCG CGCCGCGCAT CGGCGAGAAC CTCGCGCGGC TGTCGCTCGC AGCCGACGTG CGCGTCGGCG ACGCAGGAGA TCCCTCGCAA TGGCATGACG GGCGTGCGTT CGACCGGGTC CTCGCCGACG TGCCGTGCTC CGCGTCGGGT ATCGTGCGCC GCCATCCGGA CATCCGCTGG CTGCGCCGCG CGGCCGACAT TCCCGCGCTC GTCGCCGAGC AGCGCCGCAT CCTGAGCGCG CTCTGGCCGC TCGTGAAACC CGGCGGCGAG TTGCTGTATG CGACCTGCTC GATCTTTCCG GAAGAGGGCG AGCTGCAGGC GCGCTGGTTT GGAGACGCCT GTCAAGATGC GGTACGATTG GACGCGCCCG GGCAGTTGTT GCCGCAGGGC GCGACAGGCG GGGCGCCGGC CGCCGGGGGA TCGGACGAGC CCGGCCGGCA TGTCGATCAC GACGGATTCT TCTACGCGCG CTTTCAGAAA CGGTGA
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Protein sequence | MHRAAGFGVL GGWPFARSRL QNAAWGRLRT VSILRPKHRS TEAPKHRPYR TRRHIARPAT RGPNPRRATI CRLPADRPRA GHQGTSYHCP ARARASGTAD PMTQTRPSRS RASGAPARAP RQSALHLVPD SLGFALDGAA QAVDAVTRGA ALPAALAAVH ATLPANARAA SRGAIQDIAY RAMRRRGTAD WLIAQLVAKA PPAHVHALLV CAFALLVDDD EHAAYAPFTV VDQAVTAIGA RRECSFAKGL VNAVLRRFLR ERAVWLERLQ SDRRARWNYE PWWIDAVERA WPDAWPRILA SGDAPGPLTL RVNARRMTAD AYLDVLRAER IDAEKVGRHA IRLASALPVE RIPGFADGIV SVQDAGAQLA AEWLGARDGM RVLDACAAPG GKTGHILELA HAEVVALESD PARAPRIGEN LARLSLAADV RVGDAGDPSQ WHDGRAFDRV LADVPCSASG IVRRHPDIRW LRRAADIPAL VAEQRRILSA LWPLVKPGGE LLYATCSIFP EEGELQARWF GDACQDAVRL DAPGQLLPQG ATGGAPAAGG SDEPGRHVDH DGFFYARFQK R
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