Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0014 |
Symbol | |
ID | 3848806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 15414 |
End bp | 16142 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637839687 |
Product | general secretory pathway protein J |
Protein accession | YP_440574 |
Protein GI | 83721506 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG CCGTCCGCTC TGAGCGCCGC GCGCCCGGCA GAAAGCGCAC CCGGCAGGCG CGCCGCGTCT TCCGGCGAAA CGCGCGCCGC GGCGAGCGCG GCTTCACGCT GATCGAGATG ATGATCGCGA TCACGATTCT CGCGGTGATC GCGATCCTGT CGTGGCGGGG GCTCGACCAG ATCATCCGCG GCCGCGAGAA GGTGGCGGCC GCGATGGAGG ACGAGCGCGT GTTCGAGCAG ATGTTCGACC AGATGCGCAT CGACGCGCGG CGCGCCGCGA CCGACGACGA AGCGGGCCAG CCCGCGGTGC GCGTCGCGGG CGACACGTTG CAGATCGTGC GCGAGTTCGA CGCGCCGGGC GCGGCGCCGC GGCTGCAGGT CGTGCGCTAC CGGATCTCGA ACGGGCGCGT CGTGCGTTAC GCGTCGCCGC CGATCGCCGA CGTCAACGCG TTGCGCGACG CGCTGCATGG CGGCGACACC GAAGGCTGGA GCCAGGTGCC GCTGATGCGC GGCGTCGGCA TGATCAACGC GCGGCTGTAC GTGCCGAAGG TCGGCTGGAC GACCAGCATG CCGGACGCCG ACAACGCGCT CGAGCAGAAC AACAATGCGC TCAAGGTGCC GATGCTCGGC AACGCGCCGC CGCCGCGCGC GGTGACCGGG CTCGAGGTCA GCATCGGCGC GACGTCGCTG CGCGTGCCGA TCACGCGCAT ATTTCTCGTC GGGGAGTGA
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Protein sequence | MKPAVRSERR APGRKRTRQA RRVFRRNARR GERGFTLIEM MIAITILAVI AILSWRGLDQ IIRGREKVAA AMEDERVFEQ MFDQMRIDAR RAATDDEAGQ PAVRVAGDTL QIVREFDAPG AAPRLQVVRY RISNGRVVRY ASPPIADVNA LRDALHGGDT EGWSQVPLMR GVGMINARLY VPKVGWTTSM PDADNALEQN NNALKVPMLG NAPPPRAVTG LEVSIGATSL RVPITRIFLV GE
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