| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4959 |
|---|
| Symbol | capA |
|---|
| ID | 2858293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 5013921 |
|---|
| End bp | 5014664 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637516394 |
|---|
| Product | chain length regulator (capsular polysaccharide biosynthesis) |
|---|
| Protein accession | YP_039268 |
|---|
| Protein GI | 49478948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000000000799386 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA CAATTAGTTT GAAAGAGTTA TTTCATATTT TAAAAAAACG TTTAGCAATG
ATCCTCGTAA TCGCCTTTGG TGCAGCTATT GTAAGTGCTA TCATTAGCTT CTTCTTTATG
ACACCAATCT ATCAATCTTC GACGCAAATT CTGGTTAACC AAAAGAAACA AGAAGGAGCA
ATGATCCAAG CTGGTGAAGT CCAAACGAAT ATTCAATTAA CGAATACATA TAAGGTTATT
ATTAAAAGCC CAGTAATCTT AGAACAAGTA AATGAAAAAT TAAATTTAAA TATGACAGCG
CAAGCTTTAA CGAAGAAGAT TAATGTTGCG AATGAAAAAG ATTCACAAGT TATTTCTGTT
ACAGCTGATG ATAAAGATCC AAAAGTAGCT CGTGATATTG CAAATGCAAC TGCGGATGTA
TTTAAAGGTG AAGTTGCAAA AATTATGAAC GTGGATAACG TAACAGTACT ATCTAAAGCA
GAAGTTGCAG AAAATCAATC TCCAATTAAA CCACGTCCAA TGTTAAATGT GGCAATTGCC
TTCTTTGTTG GCTTAATGGC CGCAGTTGGT CTTGCATTCT TACTAGAATA CTTAGATAAC
ACAGTAAAAA AAGAAGAAGA TGTAGAGAAC TTACTTGGTT TACCAGTGTT AGGTATTGTA
GCTCGTATGG ATGAAGAAAC AATGAACGTG AAATCACACG CTCCATCATC AAGAAAAGTG
AGGGGACAAA CAATTGGCTC TTAA
|
|---|
| Protein sequence | MEETISLKEL FHILKKRLAM ILVIAFGAAI VSAIISFFFM TPIYQSSTQI LVNQKKQEGA
MIQAGEVQTN IQLTNTYKVI IKSPVILEQV NEKLNLNMTA QALTKKINVA NEKDSQVISV
TADDKDPKVA RDIANATADV FKGEVAKIMN VDNVTVLSKA EVAENQSPIK PRPMLNVAIA
FFVGLMAAVG LAFLLEYLDN TVKKEEDVEN LLGLPVLGIV ARMDEETMNV KSHAPSSRKV
RGQTIGS
|
|---|
| |