Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_4232 |
Symbol | oppC |
ID | 2857789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 4296301 |
End bp | 4297200 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637515648 |
Product | oligopeptide transport system, permease |
Protein accession | YP_038548 |
Protein GI | 49478664 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTTC GTCTTTCTAA AGAAGAAAAC ACTTCTTTAC AAACGATTCA AACGAAGAAC ACATCGAAAT GGATTATGAG CTATCGAAAA CTGAAAAGAA ATAAAATGGC ATTTATCGGA GGTATTATCG TTCTTTTCTA TATTGTTATA GCTATATTTG CCCCATTGTT AGCACCCTAT AATCCATTTG ACATTCAGTT AGTCAACAAA TTACAACCAC CATCTATGGA ACATTGGATG GGGACAGATG ATAAAGGTAG AGATATTTTA AGCCGCCTTT TACACGGGAC ACGACTTTCA TTACTTGTTG GATTTTCTTC TGTATTTATA GGAGCATTGT TCGGCATTAT TCTCGGTATC ATTTCTGGTT ATTACGGTGG ATGGTTTGAC ACGGTTATTA TGCGAATCAT CGATATCATG CTAGCTTTCC CTGGTATTTT ACTTGCTCTT GCTATTGTAG GCGCACTAGG ACCAAGTCTT GTGAACGTAA TTATCGCTAT TGGCTTTTTC TCAATCCCTA TGTTCGCTCG TATCGTTAGA GCTTCTACAT TAACAGTAAA AAAATTAGAG TATATCGATG CTATAAGAGC ACTAGGGGCA AATGACTTTA CTATTATTAT GAAACACATA TTCCCTAACA TCTTATCACC TATTATTGTC CAAGCCACTT TACGCTTAGC TACAGCAATT TTATCTGCAG CTGGATTATC ATTTTTAGGA CTTGGAGCGC AACCACCTTC ACCTGAATGG GGTGCCATGT TAAGTAATGG ACGCGACTTT TTATTTACCG CACCACATAT TGCAATGTTT CCTGGAATTG CAATGTCTAC ACTCGTAATC GGTTTAAACA TGTTTGGTGA TGGATTACGT GATGCACTAG ATCCGAGACT TAAAAAATAG
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Protein sequence | MEVRLSKEEN TSLQTIQTKN TSKWIMSYRK LKRNKMAFIG GIIVLFYIVI AIFAPLLAPY NPFDIQLVNK LQPPSMEHWM GTDDKGRDIL SRLLHGTRLS LLVGFSSVFI GALFGIILGI ISGYYGGWFD TVIMRIIDIM LAFPGILLAL AIVGALGPSL VNVIIAIGFF SIPMFARIVR ASTLTVKKLE YIDAIRALGA NDFTIIMKHI FPNILSPIIV QATLRLATAI LSAAGLSFLG LGAQPPSPEW GAMLSNGRDF LFTAPHIAMF PGIAMSTLVI GLNMFGDGLR DALDPRLKK
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