Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_3634 |
Symbol | rluD |
ID | 2858759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 3733498 |
End bp | 3734406 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637515052 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_037954 |
Protein GI | 49478436 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0043574 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG TAGTACAAGT AACAGTTGCA GAAGAACAAA AAAATGAGCG AATTGATAAA TTCGTTGCAG GAATAAATAA TGAATGGTCA CGTACACAAG TACAGCAATG GATTAAAGAT GACGTTGTAA CAGTTAATGG AAAAGCGGTA AAAGGGAATT ATAAAGTTAG AGAAGATGAT GAAATTACAG TGACGATTCC TGAGCCAGAA GAGTTAGATA TTCAACCAGA AGATATGAAT TTAGAAATTT ATTATGAAGA TGCAGATGTA CTCGTTGTTA ACAAGCCGCG TGGTATGGTT GTACATCCAG CACCAGGTCA TACAAGTGGA ACGCTTGTGA ACGGTCTTAT GCACCATTGT ACAGACTTAT CGGGTATTAA CGGTGTAATG CGTCCAGGTA TCGTGCATCG TATTGATAAG GATACATCAG GCCTATTAAT GGTTGCTAAA AATGATATGG CACACGAATC ACTTGTAAAT CAACTTGTAG CAAAAACAGT AACAAGACGC TACAAAGCGA TTGTACACGG TGTTATTCCG CATGATAAGG GAACGATTGA TGCTCCGATT GCTCGTGATA AGAAAGAACG TCAAAGTATG ACGGTTGATG AAAATGGTAA GCATGCTGTT ACGCATTTCC AAGTGTTAGA GCGATTCAAA GATTTCACAC TTGTAGAATG TCGCTTAGAA ACAGGGCGTA CACATCAAAT TCGTGTTCAT ATGAAATATA TTGGCTATCC ACTTGCAGGA GATCCAAAGT ATGGACCAAA GAAAACATTA GACATGAATG GACAAGCACT TCACGCAGGC ATTTTAGGAT TTGACCATCC TCGTACTGGT GAATATATTC AGTTTGAGGC ACCGATTCCA GAAGTGTTTG AAGATGCATT AAATATTTTA CGAAAATAG
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Protein sequence | MSEVVQVTVA EEQKNERIDK FVAGINNEWS RTQVQQWIKD DVVTVNGKAV KGNYKVREDD EITVTIPEPE ELDIQPEDMN LEIYYEDADV LVVNKPRGMV VHPAPGHTSG TLVNGLMHHC TDLSGINGVM RPGIVHRIDK DTSGLLMVAK NDMAHESLVN QLVAKTVTRR YKAIVHGVIP HDKGTIDAPI ARDKKERQSM TVDENGKHAV THFQVLERFK DFTLVECRLE TGRTHQIRVH MKYIGYPLAG DPKYGPKKTL DMNGQALHAG ILGFDHPRTG EYIQFEAPIP EVFEDALNIL RK
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