Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_2898 |
Symbol | brnQ |
ID | 2854352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 2969698 |
End bp | 2971050 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637514320 |
Product | branched-chain amino acid transport system carrier protein |
Protein accession | YP_037222 |
Protein GI | 49478017 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1114] Branched-chain amino acid permeases |
TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00345664 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA AAGTTCCTAC TTCCTTTATC ATTATTATAG GATTGATGCT GTTTGCATTG TTTTTTGGAG CAGGAAATTT AATTTTTCCA CCTATGCTTG GTCAAATGGC TGGAAATCAT GTATGGATAG CCAATGCAGG CTTTTTAGTT ACTGGAGTTG GTTTACCATT GTTAGCAATA ACAGCATTTG TTTTTTCAGG TGAAAATGAT TTGCAATCTT TAGCTAGTCG TGTGCATCCG GTGTTTGGTA TTGTATTTAC GATCGTTCTC TATCTAGCAA TTGGTCCCTT TTATGCCATC CCTAGATCTG GTAATGTATC GTTTGAAATT GGAATTAAAC CTTTTTTATC ACATGATGCA GGTTCAGTTG CCTTAACTGT ATTTACAATC TTATTTTTTA CAGTTACATG CTTGTTATCC CTTAATCCTA CAAAGATTAT TGATATAGTT GGGAAAATTT TGACTCCTAT CAAATTGACT GTTATTGGGA TGCTCGTAGT TATGACTTTT ATTCATCCAA TTGGAAGAAT TCAAGCGCCT ATTGAATTGT ATGCATCAGA TTCATTTTTT AAAGGTTTTC AAGAAGGATA TTTAACATTA GATGCTCTTG GAGCTTTTGT TTTCGGAATC ATTATCGTGA ATGCAATTAG AGAAAAAGGG GCTACGACTA AAAAGCAGCT TATGATTGTT TGTGTAAAAG CAACGGCTAT TGCTGCTACA CTCTTAGCTC TTATTTATAC TGCCCTTTCC TATATGGGCG CTTCTAGTGT AGAAAAACTA GGTCGTTTAA ATAATGGGGC TGAAGTTTTA GCAAAAGTTT CGGACTATTA CTTTGGTTCG TATGGTGCAA TTTTCTTAGG TGTAATGATT GTAGTAGCAT GTTTAATTAC AAGCGTAGGG CTTATCACTG CTTGTTCTTC TTTTTTTCAT AAATTATTTC CAAAGATTTC TTACAAAAAA CTTGCTATTA TTTTGTCTGT TTTCAGTACA CTAGTTGCGA ATATAGGGTT AACACAATTA ATTAAGATTT CAATCCCTGT ATTAATAACT ATGTATCCAA TTGCTATTAC CCTAATATTC CTAACATTTT TACACTCTGT ATTCAATGGT AGATTTGAAG TATATCAAGG GAGTTTGATA TTGACATTTA TTTTTAGTTC GTTAGATGGA TTAAAAGTTG CTGGAATAGA AAGTGAAATA ATCAATAATT TTCTTGAACA TTTTCTTCCT TTATATAGTG TAGGTTTAGG GTGGGGGGTT CCGGCTATTA TAGGCGGTGT ATGTGGGTAT GTTGTTAGTG TATTACGGAA GAAAAATACC TTAAGTTCCA GTGAAACTCA ATTAAATAAA TAA
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Protein sequence | MSNKVPTSFI IIIGLMLFAL FFGAGNLIFP PMLGQMAGNH VWIANAGFLV TGVGLPLLAI TAFVFSGEND LQSLASRVHP VFGIVFTIVL YLAIGPFYAI PRSGNVSFEI GIKPFLSHDA GSVALTVFTI LFFTVTCLLS LNPTKIIDIV GKILTPIKLT VIGMLVVMTF IHPIGRIQAP IELYASDSFF KGFQEGYLTL DALGAFVFGI IIVNAIREKG ATTKKQLMIV CVKATAIAAT LLALIYTALS YMGASSVEKL GRLNNGAEVL AKVSDYYFGS YGAIFLGVMI VVACLITSVG LITACSSFFH KLFPKISYKK LAIILSVFST LVANIGLTQL IKISIPVLIT MYPIAITLIF LTFLHSVFNG RFEVYQGSLI LTFIFSSLDG LKVAGIESEI INNFLEHFLP LYSVGLGWGV PAIIGGVCGY VVSVLRKKNT LSSSETQLNK
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